| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3579 |
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| Symbol | |
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| ID | 5357870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 3705350 |
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| End bp | 3707407 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640812629 |
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| Product | hypothetical protein |
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| Protein accession | YP_001348933 |
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| Protein GI | 152988979 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0227937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTATCA GCAGCTACAA CCAGGTTCTT GTCGCCTTTT CCCTGCTTGT GGCCATCCTC
GCGTCCTACA CCGCTCTCGA CATGGCGGGA CGGGTCACCC TGGCGAAAGG CCGCGAGGCG
GCCCTGTGGT TGAGCGGCGG CGCCTTCGCC ATGGGCTTCG GCATCTGGTC GATGCATTTC
CTCGGCATGC TCGCCTTCAG CCTGCCGATC CCGCTCGGCT ACGACCTCGG CCTGACCCTG
CTGTCGCTGC TGCTGGCCGT CGGCAGCTCG GCTTTCGCCC TGTGGCTGGT GTGCCAGGCC
GAGCTGCCCT GGCAGCGGCT GGCGTTGGGC GCCTTGCTGA TGGGTAGCGG CATTGCCGCC
ATGCACTACA CCGGCATGGC CGCCCTGCTG ATGATGCCGG GCATCGTCTA CGACCCGCTG
TGGTTCGGCC TGTCCATCCT GATCGCGGTA GTCGCTTCCG GCGCCGCGCT GTGGATCGCC
TTCCGCCTGC GCCACGGCAG CCGCCGTATC GTCCTGGTGC GCACCGGCGC CGCCCTGGTG
ATGGGCTGCG CCATCGTCGG CATGCACTAC ACCGGCATGG CCGCCGCGCA ATTTCCCCTG
GGCAGCTTCT GCGGCGCAGC CGGGCGCGGG ATCGACAATG GCTGGCTGGC GGTGCTGGTG
ATCGTCATCA CCCTGGCGGT GATCGCCATC GCGCTGATCG TCTCGGTCCT GGACTCGCGC
CTGGAAGCGC GCACCTCGGT GCTCGCCAAC TCCCTCGCGC GGGCCAACCG CGAACTGATC
CAACTGGCGC TGCACGACAA CCTGACCAAG CTGCCCAACC GCATGCTGCT CGACGACCGG
CTGGAACAGG CGATCCAGCA GGCGATTCGC GATGACCGCC GGTTCGCCGT GCTGTTCATG
GACCTCGATG GCTTCAAGGC GGTCAACGAT GCCTACGGCC ACCACCTCGG CGACCTGCTG
CTGATCGAGG TCGCCGAGCG CATCCGCGGC AATGTACGCG CCCAGGACAC CATTGCCCGC
CTTGGCGGCG ACGAGTTCGT CCTGCTGATC GAGGCGCGCG AGCCGGCCGA CGCCGCGACG
CTCGCCGAGA AACTGGTGAA GCAGATCAGC CAGCCGTACC AGATTTCCCG CCATGAGGTG
CGCGTATCGG CGAGCATCGG CATCGCCCTC TTCCCCGGCG ACGGCCAGAC CCGCCACGAA
CTGATGATCA ACGCCGACGC CGCGATGTAC CACGCCAAGG ACCAGGGGCG GAATGGCTAC
TGCTTCTTCG AGAGTTCGAT GAACGCCAAC GCCCAGGAGC AGTTGCAACT GCTCCACGAC
CTGCGTCAGG CCCTGGAGCG CCAGCAACTG GTGCTGCACT ACCAGCCCAA GGTGCTGGCG
CCGAGCGGCC CGATGATCGG CGTGGAAGCC CTGCTGCGCT GGCAGCACCC GCTGCATGGC
CTGATCACCC CGGACCAGTT CCTGCCACTG GCGGAAAAGA CCGGGCTGAT CGTGCAGATC
GGTGAGTGGG TCCTCGGCGA GGCCTGCCGG CAGATGCGTC TGTGGCTGGA CGCCGGCCAC
TCGGACTGGA GCATCGCGGT CAACCTCTCG GCCCTGCAGT TCGCCCATGC CGGACTGCTC
GACGCGGTGC GCGACGCCCT GCAGCAGCAT GCCCTGGAAC CCGCACACCT GATCCTCGAG
GTCACCGAAT CGACCGCCAT GCGGGACGCC GATGCCAGCC TGGTGATCCT CGAGCGGCTG
TCGGCGATGG GCGTCGGCAT CTCCATCGAC GATTTCGGCA CCGGCTACTC CAGCCTGCTC
TACCTCAAGC GCCTGCCGGC AAACGAACTG AAGATCGATC GCGGCTTCAT CAACGAGCTG
GCCCATGACA GCGACGACGC GGCGATCGTC TCGGCGATCG TCGCCCTGGG CCGCACGCTG
AACCTGAAGA TCGTCGCCGA AGGCGTGGAA ACCGAGGCGC AGAAGGAGTT CCTCACCCGT
CTCGGCTGCA ATTCGCTGCA GGGGTTCCTC CTCGGCAGGC CGATGCCGGC CGAGCAACTG
CTCGCCAGCG TCGCCTGA
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| Protein sequence | MLISSYNQVL VAFSLLVAIL ASYTALDMAG RVTLAKGREA ALWLSGGAFA MGFGIWSMHF
LGMLAFSLPI PLGYDLGLTL LSLLLAVGSS AFALWLVCQA ELPWQRLALG ALLMGSGIAA
MHYTGMAALL MMPGIVYDPL WFGLSILIAV VASGAALWIA FRLRHGSRRI VLVRTGAALV
MGCAIVGMHY TGMAAAQFPL GSFCGAAGRG IDNGWLAVLV IVITLAVIAI ALIVSVLDSR
LEARTSVLAN SLARANRELI QLALHDNLTK LPNRMLLDDR LEQAIQQAIR DDRRFAVLFM
DLDGFKAVND AYGHHLGDLL LIEVAERIRG NVRAQDTIAR LGGDEFVLLI EAREPADAAT
LAEKLVKQIS QPYQISRHEV RVSASIGIAL FPGDGQTRHE LMINADAAMY HAKDQGRNGY
CFFESSMNAN AQEQLQLLHD LRQALERQQL VLHYQPKVLA PSGPMIGVEA LLRWQHPLHG
LITPDQFLPL AEKTGLIVQI GEWVLGEACR QMRLWLDAGH SDWSIAVNLS ALQFAHAGLL
DAVRDALQQH ALEPAHLILE VTESTAMRDA DASLVILERL SAMGVGISID DFGTGYSSLL
YLKRLPANEL KIDRGFINEL AHDSDDAAIV SAIVALGRTL NLKIVAEGVE TEAQKEFLTR
LGCNSLQGFL LGRPMPAEQL LASVA
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