| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3525 |
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| Symbol | nirB |
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| ID | 5353784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 3650611 |
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| End bp | 3653061 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640812575 |
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| Product | assimilatory nitrite reductase large subunit |
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| Protein accession | YP_001348879 |
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| Protein GI | 152984829 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA TCAAACTGGT GATGGTCGGC AACGGCATGG CCGGGGTCCG CACCCTGGAA
GAACTGCTCA AGCTCAACTC GGACTTCTAC GACATCACGG TGTTCGGCGC CGAGCCCCAT
CCCAACTACA ACCGCATCCT GCTGTCCCCG GTGCTGGCCG GCGAACAGAC CTTCGAGGAA
ATCGTCCTCA ACGACCTCGA CTGGTATGCG GAAAACGGCA TCAAGCTGCT CCTCGACCGC
AAGGTGGTGC AGATCGACCG GGTCCGCCGC AAGGTGGTCG CCGCCGATGG CACCGAAGCC
GAGTACGATC GCCTGCTGCT GGCCACCGGC TCGCTGCCCT TCATCCTGCC GATCCCCGGC
AATCGCCTGC AGGGCGTGAT CGGCTACCGC GACATCGCCG ACACCCAGGC CATGATCGAC
TGCGCCCGGA GCCACAGCCA CGCGGTGGTG ATCGGCGGCG GCCTGCTCGG CCTGGAGGCG
GCCAATGGCC TCAAGCAGCG CGGGATGGAC GTGACCGTTG TGCACCTCTC CGACTGGCTG
CTGGAGCGCC AGCTCGACCG CACCGCCGGC AAGCTCCTGC AAGGCGCGCT GGAAGCCCGC
GGCATCCGCT TCCGCCTGAA CACCCAGACC CGCGAGCTGA TGGACAACGG CAGCGGCCGG
GTCTGTGCCG TGCAGTTCAA CGACGACGAC GTGATTCCCG CCGACCTGGT GGTAATGGCC
GCCGGCATCC GTCCCAACAC CGAGCTGGCC GAAAGCGCAG GCATCCCCTG CAACCGCGGC
ATCCTGGTCA ACGACACCCT GCAGACCTAC GATCCGCGCA TCTATGCGGT CGGCGAATGC
GCCAACCACC GTGGCATCGC CTACGGCCTG GTGGCGCCAC TGTTCGAACA GGCCAAGGTC
TGCGCCAACC ACCTGGCTCA TCTCGGCTAT GCCCGCTACC AGGGCTCGGT GACCTCGACC
AAGCTCAAGG TGACCGGCAT CGACCTGTTC TCCGCCGGCG ACTTCATCGG CGGCGAAGGC
AGCGAGACCA TCACCCTTTC CGACCCCATC GGCGGCGTCT ACAAGAAGCT GGTGATCAAG
GACGACGTGC TGGTCGGCGC CTGCCTCTAT GGCGACACCA CCGACGGCGG CTGGTACTTC
CGGCAGATCC GCGAAAACCA CAACGTGGCG CAGATCCGCG ACCACCTGAT GTTCGGCGAG
AACGCCCTCG GCGATGTCGG CCACCAGGGC CAGAACAGCG CCGCGAGCAT GCCCGACACG
GCCGAAGTAT GCGGTTGCAA CGGCGTCTGC AAGGGCGCCA TCGTCAAGGC GATACAGGAA
CACGGCCTGT TCAGCGTCGA CGAAGTCAAG AAACACACCA AGGCCGCCAG CTCCTGCGGC
TCCTGCGCGG GCCTGGTCGA GCAGATCCTG ATCAGCACCG TCGGCGGCGC CGCCGACGTC
AAGCCGAAGA GCGAGAAGGC CATCTGCGGT TGCAGCGAGC TCAACCACGG GCAGATCCGC
AAGGCCATCC GCGAACACCG GCTGACCAGT CTCGACGCCG CCATGCGCTT CATGGACTGG
AAGACCCCGA ACGGCTGCGC CACCTGCCGC CCAGCGCTGA ACTACTACCT GATCTCGACC
TGGCCGGGAG AGGCCAGGGA CGACCCGCAG TCGCGCCTGA TCAACGAACG TGCCCACGCC
AATATCCAGA AGGACGGCAC CTACTCGGTG GTCCCGCGGA TGTGGGGCGG TGTGACCAGC
GCCGCCGAGT TGCGGCGCAT CGCCGACGTC GCCGACAAGT ACCAGGTGCC GATGGTCAAG
GTCACCGGCG GCCAGCGCAT CGACCTGCTG GGGGTGAAGA AGGACGACCT GCCGGCCATC
TGGAAAGACC TCGACATGCC CTCGGGACAT GCCTACGGCA AATCCATCCG CACCGTGAAG
ACCTGCGTCG GCAGCGAGTT CTGCCGCTTC GGCACGCAGA ACTCGACGCA ACTGGGCATC
GACCTGGAAC ACGACCTGTT CAACATGTGG TCGCCGCACA AGGTCAAGCT GGCGGTTTCC
GGCTGCCCGC GCAATTGCGC CGAGGCCGGG ATCAAGGATG TCGGCATCAT CGGCGTGGAC
TCCGGCTGGG AGATGTACAT CGGCGGCAAC GGCGGGATCA AGACCGAGGT CGCGGAGTTC
TTCGTCAAGC TCAAGACCGC CGAAGAGGTG CGCGAATACA ACGGCGCCTT CCTCCAGCTC
TACCGCGAGG AAGCCTTCTA TCTGGAGCGC ACGGTGCATT ACCTGCAGCG GGTCGGCATG
GCGCATATCC GCAAGGCGGT GGTCGAGGAC GCGGAAAACC GCAAGGCACT CAACGCCCGC
CTGCAATTCG CCCTGTCCTT CGAGCAGGAC CCATGGAAGC AGCGCATCGA ACAGCCGCTA
CTGAAGAAGG AGTTCGAACG GATTCCGCTC AAGCAACTGG AAAACGTCTG A
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| Protein sequence | MKKIKLVMVG NGMAGVRTLE ELLKLNSDFY DITVFGAEPH PNYNRILLSP VLAGEQTFEE
IVLNDLDWYA ENGIKLLLDR KVVQIDRVRR KVVAADGTEA EYDRLLLATG SLPFILPIPG
NRLQGVIGYR DIADTQAMID CARSHSHAVV IGGGLLGLEA ANGLKQRGMD VTVVHLSDWL
LERQLDRTAG KLLQGALEAR GIRFRLNTQT RELMDNGSGR VCAVQFNDDD VIPADLVVMA
AGIRPNTELA ESAGIPCNRG ILVNDTLQTY DPRIYAVGEC ANHRGIAYGL VAPLFEQAKV
CANHLAHLGY ARYQGSVTST KLKVTGIDLF SAGDFIGGEG SETITLSDPI GGVYKKLVIK
DDVLVGACLY GDTTDGGWYF RQIRENHNVA QIRDHLMFGE NALGDVGHQG QNSAASMPDT
AEVCGCNGVC KGAIVKAIQE HGLFSVDEVK KHTKAASSCG SCAGLVEQIL ISTVGGAADV
KPKSEKAICG CSELNHGQIR KAIREHRLTS LDAAMRFMDW KTPNGCATCR PALNYYLIST
WPGEARDDPQ SRLINERAHA NIQKDGTYSV VPRMWGGVTS AAELRRIADV ADKYQVPMVK
VTGGQRIDLL GVKKDDLPAI WKDLDMPSGH AYGKSIRTVK TCVGSEFCRF GTQNSTQLGI
DLEHDLFNMW SPHKVKLAVS GCPRNCAEAG IKDVGIIGVD SGWEMYIGGN GGIKTEVAEF
FVKLKTAEEV REYNGAFLQL YREEAFYLER TVHYLQRVGM AHIRKAVVED AENRKALNAR
LQFALSFEQD PWKQRIEQPL LKKEFERIPL KQLENV
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