Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3478 |
Symbol | |
ID | 5359658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3601478 |
End bp | 3603733 |
Gene Length | 2256 bp |
Protein Length | 751 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640812529 |
Product | putative Orn/Arg/Lys decarboxylase |
Protein accession | YP_001348838 |
Protein GI | 152984589 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAAG ACCTCAAATT TCCCGTCCTC ATCGTCCATC GCGACATCAA GGCCGACACC GTTGCCGGCG AACGCGTGCG GGGCATCGCC CACGAGCTGG AGCAGGACGG CTTCAGCATT CTCTCCACCG CCAGTTCCGC CGAAGGACGC ATCGTCGCCT CGACCCATCA CGGCCTGGCC TGCATCCTGG TCGCCGCCGA AGGCGCCGGG GAAAACCAGC GCCTGCTGCA GGATGTGGTG GAGCTGATCC GCGTGGCCCG CGTGCGGGCG CCGCAACTGC CGATCTTCGC CCTTGGCGAG CAGGTGACCA TCGAGAACGC CCCTGCCGAG TCGATGGCCG ACCTGCACCA GTTGCGCGGC ATCCTCTATC TGTTCGAGGA CACCGTGCCG TTCCTCGCCC GCCAGGTCGC CCGCGCGGCG CGCAACTACC TGGCCGGCCT GCTGCCGCCG TTCTTCCGCG CGCTGGTCGA GCACACCGCG CAGTCCAACT ACTCCTGGCA CACGCCGGGC CACGGCGGTG GCGTCGCCTA CCGGAAGAGC CCGGTGGGAC AGGCGTTCCA CCAGTTCTTC GGGGAGAACA CGCTGCGTTC GGACCTGTCG GTCTCGGTCC CCGAACTGGG CTCGCTGCTC GATCACACCG GTCCCCTGGC CGAGGCCGAG GACCGCGCCG CGCGCAACTT CGGCGCGGAC CACACGTTCT TCGTGATCAA CGGCACTTCC ACCGCGAACA AGATCGTCTG GCACTCGATG GTCGGCCGCG AGGACCTGGT GCTGGTTGAT CGCAACTGCC ACAAGTCGAT CCTCCATTCG ATCATCATGA CCGGGGCGAT CCCGCTCTAC CTGACCCCGG AGCGCAACGA ACTGGGCATC ATCGGGCCGA TCCCGCTGAG CGAGTTCAGC CGGGAGTCGA TCGCCGCGAA AATCGCCGCC AGCCCGCTGG CGCGTGGCCG CGAACCGAAG GTGAAGCTGG CGGTGGTGAC CAACTCCACC TATGACGGCC TGTGCTACAA CGCCGAGCTG ATCAAGCAAA CCCTCGGCGA CAGCGTCGAG GTGCTGCACT TCGACGAGGC CTGGTACGCC TATGCGGCGT TCCACGAGTT CTACGACGGC CGCTATGGCA TGGGCACCTC GCGCAGCGAG GCGGGCCCCC TGGTGTTCGC CACCCACTCC ACGCACAAGA TGCTCGCCGC CTTCAGCCAG GCCTCGATGA TCCACGTGCA GGACGGCGGC GCGCGCCAGC TGGACGTGGC GCGCTTCAAC GAAGCCTTCA TGATGCACAT TTCCACCTCG CCGCAGTACG GCATCATCGC CTCGCTGGAC GTGGCCTCGG CGATGATGGA GGGGCCCGCC GGGCGCTCGC TGGTCCAGGA AACCTTCGAC GAGGCCCTGA GCTTCCGCCG CGCCCTGGCC AACGCGCGAC AGAACCTCGG TCGTGGCGAC TGGTGGTTCG GCGTCTGGCA GCCGGAGCAG GTGGAGGGCA CCGACCAGGT GCGCACCGGC GACTGGGTGC TGGAGCCGAG CGCCGATTGG CACGGCTTCG GCGACATCGC CGAAGACTAC GTGTTGCTCG ACCCGATCAA GGTCACCCTG ACCACGCCGG GGCTGAGCGC CGGCGGCAAG CTCGGCGAGC AGGGCATTCC CGCCGCCATC GTCAGCCGTT TCCTCTGGGA GCGTGGCCTG GTGGTGGAAA AGACCGGCCT GTATTCCTTC CTGGTGCTGT TCTCGATGGG CATCACCAAG GGCAAGTGGA GCACCCTGGT CACCGAACTG CTCGAGTTCA AGCGTTGCTA CGACGCCAAC CTGCCGCTCG TCGATGTCTT GCCTTCGGTG GCCCAGGCCG GCGGCAAGCG CTACAACGGC ATGGGTCTGC GCGACCTCAG CGACGCCCTG CACGCCAGCT ATCGCGACAA TGCCACGGCG AAGGCCATGA AGCGCATGTA CACGGTGTTG CCGGAAGTCG CGATGCGTCC GTCCGAGGCC TACGACAAGC TGGTCCGCGG CGAGGTCGAG GCGGTACCGA TCGCCCAACT GGAAGGGCGC ATCGCCGCCG TCATGCTGGT ACCCTATCCG CCGGGCATCC CGCTGATCAT GCCGGGTGAG CGCTTCACCG AGGCGACCCG CTCGATCCTC GACTATCTCG AGTTCGCGCG GACCTTCGAG CGCGCCTTCC CCGGCTTCGA TTCCGATGTG CACGGCCTGC AGCATCAGGA CGGACCGTCC GGGCGCTGCT ATACCGTTGA ATGCATAAAG GAATGA
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Protein sequence | MYKDLKFPVL IVHRDIKADT VAGERVRGIA HELEQDGFSI LSTASSAEGR IVASTHHGLA CILVAAEGAG ENQRLLQDVV ELIRVARVRA PQLPIFALGE QVTIENAPAE SMADLHQLRG ILYLFEDTVP FLARQVARAA RNYLAGLLPP FFRALVEHTA QSNYSWHTPG HGGGVAYRKS PVGQAFHQFF GENTLRSDLS VSVPELGSLL DHTGPLAEAE DRAARNFGAD HTFFVINGTS TANKIVWHSM VGREDLVLVD RNCHKSILHS IIMTGAIPLY LTPERNELGI IGPIPLSEFS RESIAAKIAA SPLARGREPK VKLAVVTNST YDGLCYNAEL IKQTLGDSVE VLHFDEAWYA YAAFHEFYDG RYGMGTSRSE AGPLVFATHS THKMLAAFSQ ASMIHVQDGG ARQLDVARFN EAFMMHISTS PQYGIIASLD VASAMMEGPA GRSLVQETFD EALSFRRALA NARQNLGRGD WWFGVWQPEQ VEGTDQVRTG DWVLEPSADW HGFGDIAEDY VLLDPIKVTL TTPGLSAGGK LGEQGIPAAI VSRFLWERGL VVEKTGLYSF LVLFSMGITK GKWSTLVTEL LEFKRCYDAN LPLVDVLPSV AQAGGKRYNG MGLRDLSDAL HASYRDNATA KAMKRMYTVL PEVAMRPSEA YDKLVRGEVE AVPIAQLEGR IAAVMLVPYP PGIPLIMPGE RFTEATRSIL DYLEFARTFE RAFPGFDSDV HGLQHQDGPS GRCYTVECIK E
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