| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3320 |
|---|
| Symbol | |
|---|
| ID | 5359596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3434489 |
|---|
| End bp | 3435652 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640812371 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001348680 |
|---|
| Protein GI | 152986289 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3287] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGACG GACACGGGGA AGGGGTCACC AGGGGCATGT CCAGCGCCCG CGACGTCGAG
GCGGTGGCCC AGGACCTGGC GCGCCAGCTG ATCCACCCGC ACCTGGGCTT CGTGCTGTTC
TTCTGTTCCG CCGAATACGA CCTGCCGGCC CTCGCCGCGA TGCTCGAACG CTACTTCGGC
GGCATCGACC TGGTCGGCTG CACCACCGCC GGCGAGATCA CCCCGCAAGG CTATGGCCGA
GGTTGCGTCA GCGCGGTGGG CTTCGACCTG CGCAGCTTCG CCATCGCCAG CGTGCTGATC
GACGAGATGG AGCGCTTCAG CCTGCTCGAC GCCCAGCAGA TGGTCGAGCG CCTGGTCGCC
GATTGCCGCA GCGGCGGCCT GGCGCCGATC AAGGGCCACA GCTTCGCCCT GACCCTGCTC
GACGGCCTGT CCAGTCGCGA GGAGGTGGTG CTCGCCGCGC TCAGCGCGGC CCTTGGGGCG
ATCCCGCACT TCGGCGGATC GGCCGGCGAC GACAACCACC TGACCCATAC CCACGTCTAC
CACCGGGGCC AGTTCCATAC CGGCGCGGCG GTGGTGCTGC TGGTCAACAC CTGGCTGGAC
TTCGAGGTCT TCACCACCCA TCACGTGCTG CCGCGCGCCG AGAAGCTGGT GGTGACCCGC
GCCGACAGCG GCAGCCGGCG CGTCCACGAA CTCAACGCCG AACCGGCGGC ACTGGAGTAC
GCGCGGCTGG TCGGAGTGGC GCCGGAGGCG CTGGACTTCG CCCTGTTCTC CGCCCATCCG
CTGGCGGTGC GGGTCGACGA CCGCTATTAC GTGCGCTCGA TCCAGCAGGC CAACGACGAC
CTCAGCCTGA CCTTCTACTG CGCGGTGGAG AACGGCATCG TCCTCACCGC GATGAGCACC
GGGCCGCTGC TGCCCAACCT GGAGGCGCAG TTCCGCCGGC TGCACGAGCG CCTCGGACCG
CCGTTGCTGA CCATCGGTTG CGACTGCTTC CTGCGGCGCC TGGAGCTGGA GGTCGGCGGC
GACACGGAAG CTACCGCCGC GTTTCTCCGC AGCCAGCAGG TGATCGGCTT CAACACCTAC
GGAGAGCAAT TCAATGGCAT GCATATCAAC CAGACCTTCA CCGGGGTCGC CATTGGCCGA
CCCCGCGGAG GTGTCCGTCG CTGA
|
|---|
| Protein sequence | MYDGHGEGVT RGMSSARDVE AVAQDLARQL IHPHLGFVLF FCSAEYDLPA LAAMLERYFG
GIDLVGCTTA GEITPQGYGR GCVSAVGFDL RSFAIASVLI DEMERFSLLD AQQMVERLVA
DCRSGGLAPI KGHSFALTLL DGLSSREEVV LAALSAALGA IPHFGGSAGD DNHLTHTHVY
HRGQFHTGAA VVLLVNTWLD FEVFTTHHVL PRAEKLVVTR ADSGSRRVHE LNAEPAALEY
ARLVGVAPEA LDFALFSAHP LAVRVDDRYY VRSIQQANDD LSLTFYCAVE NGIVLTAMST
GPLLPNLEAQ FRRLHERLGP PLLTIGCDCF LRRLELEVGG DTEATAAFLR SQQVIGFNTY
GEQFNGMHIN QTFTGVAIGR PRGGVRR
|
|---|
| |