| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3270 |
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| Symbol | |
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| ID | 5359275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 3381030 |
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| End bp | 3384167 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640812321 |
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| Product | multidrug efflux protein |
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| Protein accession | YP_001348630 |
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| Protein GI | 152987095 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGTT TCTTCATTGA CCGGCCGGTC TTCGCCTGGG TGGTTTCCCT GCTGATCGTG
CTCGCCGGGA TCCTGGCGAT CCGCTTCCTT CCGGTCGCCC AGTACCCGGA CATCGCGCCG
CCGGTGGTCA ACGTCAGCGC CAGCTATCCC GGCGCCTCGG CCAAGGTGGT CGAGGAAGCG
CTGACCGCGA TCATCGAGCG CGAGATGAAC GGCGCGCCCG GCCTGCTCTA CACCAAGGCC
ACCAGCAGCA CCGGCCAGGC CTCGCTGACC CTGACCTTCC GCCAGGGCGT GAACGCCGAC
CTCGCCGCGG TGGAAGTGCA GAACCGCCTG AAGATCGTCG AATCGCGCCT GCCCGAGTCG
GTGCGGCGCG ACGGCATCTA CGTGGAGAAA GCGGCGGACA GCATCCAGCT GATCGTCACC
CTCACCTCCG CCAGCGGTCG CTACGGTGCC ATGGAGCTGG GCGAGATCGC CTCGTCCAAC
GTGCTCCAGG CGCTGCGCCG GGTGGAAGGC GTGGGCAAGG TCGAGACCTG GGGCGCCGAG
TACGCCATGC GCATCTGGCC GGACCCGGCC AGGCTGACCT CGATGAACCT CAGCGCCAGC
GACCTGGTCA ACGCCGTGCG CCGGCACAAC GCCCGTCTCA CCGTGGGCGA CATCGGCAAC
CTCGGGGTCC CCGACTCGGC ACCGATCAGC GCCACGGTGA AGGTCGACGA CACCCTGGTG
ACGCCCGAGC AGTTCGGCGA GATTCCCCTG CGCATCCGCG CCGATGGCGG CGCGATCCGC
CTGCGCGACG TGGCCCGCGT CGAGTTCGGC CAGAGCGAGT ACGGCTTCGT CTCGCGGGTC
AACCAGATGA CCGCCACCGG CCTGGCGGTG AAGATGGCGC CCGGCTCCAA CGCGGTGGCC
ACCGCCAAGC GCATCCGCGC CACCCTCGAC GAGCTGTCGC GCTACTTCCC CGAAGGCGTG
AGCTACAACA TTCCCTACGA CACCTCGGCG TTCGTCGAGA TTTCGATCAG GAAGGTGGTC
AGCACCCTGC TCGAGGCAAT GCTCCTGGTG TTCGCCGTGA TGTACCTGTT CATGCAGAAC
TTCCGCGCCA CCCTGATCCC GACGCTGGTG GTGCCGGTTG CCCTGCTCGG CACCTTCACG
GTGATGCTCG GCCTGGGCTT CTCGATCAAC GTGCTGACCA TGTTCGGCAT GGTCCTGGCG
ATCGGCATCC TGGTGGACGA CGCGATCATC GTGGTGGAGA ACGTCGAGCG CCTGATGGCC
GAGGAAGGCC TGTCGCCGCA CGACGCCACA GTCAAGGCGA TGCGCCAGAT CAGCGGGGCG
ATCGTCGGCA TCACCGTGGT GCTGGTCTCG GTGTTCGTGC CGATGGCCTT CTTCAGCGGC
GCGGTGGGCA ACATCTACCG CCAGTTCGCG GTGACCCTGG CGGTGTCCAT CGGCTTCTCG
GCGTTCCTCG CGCTGTCCTT GACCCCGGCG CTGTGCGCCA CCCTGCTGCG CCCGCTCGAC
GCCGGCCACC ACGAGAAGCG CGGCTTCTTC GGCTGGTTCA ACCGTACCTT CCTGCGCCTG
ACCGGGCGCT ACCAGAAGGC CGTGGGCGGG ATTCTCGCCC GGCCGATCCG CTGGATGCTG
GTCTACGCCC TGGTCATCGG CGTGGTCGCC CTGCTCTTCG CGCGCCTGCC CCAGGCGTTC
CTGCCGGAAG AGGACCAGGG CGACTTCATG ATCATGGTGA TGCAGCCCGA GGGCACGCCG
ATGGCGGAAA CCATGGCCAA CGTCGCCGAC GTCGAGCGCT ACCTGGCGGA ACACGAGCCG
GTGGCCTACG CCTATGCGGT CGGCGGCTTC AGCCTGTACG GCGACGGCAC CAGTTCGGCG
ATGATCTTCG CCACCCTGAA GGACTGGTCC GAGCGCCAGG ACGCCAGCCA GCACGTCGGC
GCCATCGTCG AGCGGATCAA CCAGCGCTTC GCCGGCCTGC CCAACCGCAC GGTGTACGCG
ATGAACTCGC CGCCGCTGCC GGACCTGGGC TCCACCAGCG GCTTCGACTT CCGCCTGCAG
GACCGCGGCG GGGTCGGCTA CGACGCCCTG GTCAAGGCCC GCGACCAGCT CCTGGCACGC
GCCGCCGAGG ACCCGCGGCT GGCCAACGTG ATGTTCGCCG GCCAGGGCGA GGCGCCGCAG
ATCCGCCTGG ACATCGACCG GCGCAAGGCG GAGACCCTCG GGGTGAGCAT GGACGAGATC
AACACCACCC TGGCCGTGAT GTTCGGCTCG GACTACATCG GCGACTTCAT GCACGGCAGC
CAGGTGCGCA AGGTGGTGGT CCAGGCCGAT GGCGCCAGGC GCCTGAGCAT CGACGACATC
GGCAAGCTGC ACGTGCGCAA CGAGCAGGGC GAGATGGTCC CGCTGGCGAC GTTCGCCAGG
GCCGCCTGGA CCCTCGGCCC GCCGCAACTG ACCCGCTACA ACGGCTACCC CTCGTTCAAC
CTCGAGGGCC AGGCCGCGCC GGGCTACAGC AGCGGCGAGG CGATGGCGGC GATGGAACAG
CTGATGCAGG GCCTGCCCGA GGGCGTCGCC CACGAGTGGT CCGGCCAGTC CTACGAGGAA
CGCCTGTCCG GCGCCCAGGC GCCGGCGCTG TTCGCCCTCT CGGTGCTGAT CGTGTTCCTC
GCCCTGGCCG CCCTCTACGA GAGCTGGTCG ATCCCACTGG CGGTGATCCT GGTGGTGCCG
CTGGGCGTGC TCGGCGCGCT GCTCGGGGTG AGCCTGCGCG GCCTGCCCAA CGACATCTAC
TTCAAGGTCG GCCTGATCAC CATCATCGGC CTCTCGGCGA AGAACGCCAT CCTCATCATC
GAGGTGGCCA AGGACCATTA CCAGGAAGGC ATGGACCTGC TGCAGGCGAC CCTGGAAGCC
GCGCGCCTGC GCCTGCGGCC GATCGTCATG ACCTCGCTGG CCTTCGGTTT CGGGGTGATC
CCGCTGGCGC TCTCGAGCGG CGCCGGTTCC GGCGCCCAGA TCGCCATCGG CACCGGGGTG
CTCGGCGGGA TAGTCACCGC CACCGTGCTC GCGGTGTTCC TGGTGCCGCT GTTCTTCCTG
GTGGTCGGCC GCCTGTTCCG GCTGCGCAAG GCGCCTCGCG CCGATGCGTC GGCCAATACC
CCAACGGAGC TGACCTGA
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| Protein sequence | MARFFIDRPV FAWVVSLLIV LAGILAIRFL PVAQYPDIAP PVVNVSASYP GASAKVVEEA
LTAIIEREMN GAPGLLYTKA TSSTGQASLT LTFRQGVNAD LAAVEVQNRL KIVESRLPES
VRRDGIYVEK AADSIQLIVT LTSASGRYGA MELGEIASSN VLQALRRVEG VGKVETWGAE
YAMRIWPDPA RLTSMNLSAS DLVNAVRRHN ARLTVGDIGN LGVPDSAPIS ATVKVDDTLV
TPEQFGEIPL RIRADGGAIR LRDVARVEFG QSEYGFVSRV NQMTATGLAV KMAPGSNAVA
TAKRIRATLD ELSRYFPEGV SYNIPYDTSA FVEISIRKVV STLLEAMLLV FAVMYLFMQN
FRATLIPTLV VPVALLGTFT VMLGLGFSIN VLTMFGMVLA IGILVDDAII VVENVERLMA
EEGLSPHDAT VKAMRQISGA IVGITVVLVS VFVPMAFFSG AVGNIYRQFA VTLAVSIGFS
AFLALSLTPA LCATLLRPLD AGHHEKRGFF GWFNRTFLRL TGRYQKAVGG ILARPIRWML
VYALVIGVVA LLFARLPQAF LPEEDQGDFM IMVMQPEGTP MAETMANVAD VERYLAEHEP
VAYAYAVGGF SLYGDGTSSA MIFATLKDWS ERQDASQHVG AIVERINQRF AGLPNRTVYA
MNSPPLPDLG STSGFDFRLQ DRGGVGYDAL VKARDQLLAR AAEDPRLANV MFAGQGEAPQ
IRLDIDRRKA ETLGVSMDEI NTTLAVMFGS DYIGDFMHGS QVRKVVVQAD GARRLSIDDI
GKLHVRNEQG EMVPLATFAR AAWTLGPPQL TRYNGYPSFN LEGQAAPGYS SGEAMAAMEQ
LMQGLPEGVA HEWSGQSYEE RLSGAQAPAL FALSVLIVFL ALAALYESWS IPLAVILVVP
LGVLGALLGV SLRGLPNDIY FKVGLITIIG LSAKNAILII EVAKDHYQEG MDLLQATLEA
ARLRLRPIVM TSLAFGFGVI PLALSSGAGS GAQIAIGTGV LGGIVTATVL AVFLVPLFFL
VVGRLFRLRK APRADASANT PTELT
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