Gene PSPA7_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_3178 
Symbol 
ID5357434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp3289796 
End bp3290320 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content65% 
IMG OID640812229 
Producthypothetical protein 
Protein accessionYP_001348538 
Protein GI152984475 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.613777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAC CCATTCGCCT GCCCCTGAAG GGAGCCACGT GGCTCCTGCT ACTGCTGGTC 
CTGCCTTTCG CCAACGCCCA GGACATGAAC ACCACTGCGC CGCAGACCTT CGTCAGCGAG
GCCTCGGCGG CCGGCGTGGC GGAAATCGAG GCCGGCAAGA TGGCGCTGGA AAAAAGCACC
GCTGCCGATG TGAAGGTCTT CGCCAAGCAG ATGATCGATG ACCACGGCAA GGTCAACGCC
GAACTGCGTA GCCTGGCCCA GCGCAAGAAG CTCGAGGTCG AGGACGATGC CAGCCTGACC
GACAAGGCCA AGGCGACCCT GCTCGACCTG CGCGACGCTT CCTTCGACCC GGCCTACGCC
AACAACCAGG TGGCCGCCCA TGAGAAGGCC GTCGAGTTGT TCACCCGGGC CGCGGACAAC
CTGACCGATC CCGACCTGCA GGCGTTCGCC AGGACCCAAC TGCCGACCCT GAAGCATCAC
CTGGAGATGG CCCGCGCACT GGCCAAGGCG CACCCATCCA AGTAG
 
Protein sequence
MNRPIRLPLK GATWLLLLLV LPFANAQDMN TTAPQTFVSE ASAAGVAEIE AGKMALEKST 
AADVKVFAKQ MIDDHGKVNA ELRSLAQRKK LEVEDDASLT DKAKATLLDL RDASFDPAYA
NNQVAAHEKA VELFTRAADN LTDPDLQAFA RTQLPTLKHH LEMARALAKA HPSK