Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3178 |
Symbol | |
ID | 5357434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3289796 |
End bp | 3290320 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640812229 |
Product | hypothetical protein |
Protein accession | YP_001348538 |
Protein GI | 152984475 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.613777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAC CCATTCGCCT GCCCCTGAAG GGAGCCACGT GGCTCCTGCT ACTGCTGGTC CTGCCTTTCG CCAACGCCCA GGACATGAAC ACCACTGCGC CGCAGACCTT CGTCAGCGAG GCCTCGGCGG CCGGCGTGGC GGAAATCGAG GCCGGCAAGA TGGCGCTGGA AAAAAGCACC GCTGCCGATG TGAAGGTCTT CGCCAAGCAG ATGATCGATG ACCACGGCAA GGTCAACGCC GAACTGCGTA GCCTGGCCCA GCGCAAGAAG CTCGAGGTCG AGGACGATGC CAGCCTGACC GACAAGGCCA AGGCGACCCT GCTCGACCTG CGCGACGCTT CCTTCGACCC GGCCTACGCC AACAACCAGG TGGCCGCCCA TGAGAAGGCC GTCGAGTTGT TCACCCGGGC CGCGGACAAC CTGACCGATC CCGACCTGCA GGCGTTCGCC AGGACCCAAC TGCCGACCCT GAAGCATCAC CTGGAGATGG CCCGCGCACT GGCCAAGGCG CACCCATCCA AGTAG
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Protein sequence | MNRPIRLPLK GATWLLLLLV LPFANAQDMN TTAPQTFVSE ASAAGVAEIE AGKMALEKST AADVKVFAKQ MIDDHGKVNA ELRSLAQRKK LEVEDDASLT DKAKATLLDL RDASFDPAYA NNQVAAHEKA VELFTRAADN LTDPDLQAFA RTQLPTLKHH LEMARALAKA HPSK
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