| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3021 |
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| Symbol | |
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| ID | 5356582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3117984 |
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| End bp | 3120590 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640812072 |
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| Product | usher |
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| Protein accession | YP_001348381 |
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| Protein GI | 152988280 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.383508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTGCC GCGTTGACTT CCGCCGCGCC CACATGGCGC CGCTGGCACT GGGCAGCCTG
GCGCTGGCCG TCACCGGCCT GGCCGGTGCG GAGCAATATC GCTTCGACGA CAACCTGCTG
CTGGGCTCGG GCCTGGCCGG CGGCAGCCTG GAGCGCTTCA ACCGCGCCAA CCAGGTGGAC
CCCGGCAGCT ACCACGTCGA CATCTACCTC AACGGCAGCT ACGCCAGCCG CGCCAGGGTC
GAATTCCGCA GCCGCAACGA TGGCGTCGAG CCCTGCTTCA GCGAGCGCTT CCTGCGCCAG
ACGCTCGGCG CCCACGCGGT CCCCAATACC GACGGGAACG ATAGGCAAGC CTGCCAGGGC
CTGCTGGAAC GCCTGCCCGG CTCGACCTTC ACCCTCGACA CCGCCCGCCT GCGCCTGGAC
CTCTCGGTCC CCCAGGCCCT GCTGGACCTC AAGCCGCGCG GCTACGTAAG CCCCGACGAG
TGGGACGCCG GCAGCACCAT GGGCTTCGTC AACTACGACG CCAGCCTGTA CCGCTCCAGC
TTCGACGGAG CGGGCAATGG CCACTCGGAC TACGGCTACC TGGGGTTGAG CGGCGGGATC
AATCTCGGCC TCTGGCGCCT GCGCCACCAG TCCAACTACA CCTATTCCAG CTATGCCGGC
AATACCCGCA GCGACTGGAA CAGCATCCGT ACCTACGTAC AGCGCGCGGT GCCCGGCCTG
CGCAGCGAGC TGACCCTGGG CGAAAGCTAT ACCGAAGGCA ACCTGTTCGG CAGCCTGGGC
TACCGTGGCG TGCGCCTGGC CAGCGACGAC CGCATGCTGC CGGAGTCGCA GCGCCGCTAC
GCGCCGCAGG TGCGCGGCAC GGCCAACAGC AATGCGCGGG TGGTCATCAG CCAGAACGGC
AAGAAGATCC ACGAGGCCGT CGTCGCCCCC GGCCCGTTCG TCATCGACGA CCTCTACGGC
ACCGCCTACG ACGGCGACCT GGATGTCCAG GTGATCGAGG CCGACGGCAG CGTATCGCGC
TTTTCCGTGC CCTTTTCCGC GGTTCCCGAG TCCATGCGCC CCGGTATCTC GCGCTATGCC
GCCACCCTCG GCCAGGCGCG CCAGTATGGC GACGGCAACG ACCTGTTCGG CGACTTCACC
TACCAGCGCG GCCTGACCAA CGCCCTGACC GCCAACCTTG GCGCGCGCAT GGCCGAGGAC
TACCTGGCGC TGCTCGGCGG CGGCGTGTTC GCCACGCGCT ACGGCGCCTT CGGCCTGAAC
ACCACCTTTT CCAGCGCCAC GGTGGAAAAC GGCCAGCGCA AGCAGGGCTG GCGTGTCGGC
CTGAACTACA GCCGCACCTT CCAGCCGACC CAGACCACCC TCACCCTCGC CGGCTACCGG
TACTCCACCG AGGGCTATCG CGACCTGGGC GACGCGCTGT CGGCACGCCA CGCGGACCAG
CGCCACGACA CCTGGAACTC CAGCAGCTAC AAGCAGCGCA ACCAGTTCAC CGTGCTGGTC
AACCAGGGCC TGGGCGAATA CGGCAACCTC TACCTGTCCG GCGCCACCAG CGACTACTAC
GACGGCAAGA GCCGCGACAC CCAGTTGCAG TTCGGCTACA GCAACACCTG GCGCCGGCTC
AGCTACAACC TGGCCTACTC GCGCCAGCAG ACCACCTGGT ACCGCGACCT GGACAACGAC
TACGACCCGT CGCTGCCGCC GCAGTACAAC CTGCGCCGCG GCAGCGAGCG CAACGATACC
CTGACCCTGA CGCTGTCCCT GCCGCTGGGT TCCTCCAGCC GCGCGCCGAA CCTCAGCGCG
ATGGCCTCGC GGCGCTCGGG CGACAGCCGT GGCAGCAGTT ACCAGACCGG TCTCAACGGT
ACTCTCGGGG AGGACCGCAG CCTGAGCTAT GCCATCAACG CCGGACGCGA CAGCCAGGCC
CGCGGCACCG ATTTCAACGG CAGCCTGCAG AAACAGACCG CCGTGGCCAC GGTCAACGCC
GGCTACGCCG AGAGCGCCAG CTACCGGCAG TTGAATGCCG GTTTGCGCGG CGCCGCCGTG
CTGCATCGCG GCGGCCTGAC CCTGGGGCCC TATGTCGGCG ACACCTTCGC CCTGATCGAG
GCCAAGGGCG CCAGCGGCGC GGGCGTTCGC GGCGGCCAGG GCGCGCGGGT GGACGGCAAC
GGCTATGCCG TGGTGCCCTC GCTCTCGCCC TACCGCTACA ACCCGGTCAG CCTCGACCCC
CAGGGCATGG GCGAAACGGC CGAACTGGTG GAGACCGAAC GCAAGATAGC GCCCTACGCC
GGCGCCGCCG TTCACGTGAG GTTCAAGACG CTGACCGGCC ACCCGCTGCT GATCCAGGCG
CAGCTTCCCG ACGGCGGCGC GCTGCCCCTG GGCGCCGACG TACTCGACAG GCGCGGCGTG
ACCATCGGCA TGGTCGGCCA GGGCGGCCAG GTCTATGCCC GCGCCGAAGG CGACCAGGGC
CGCCTGCGCG TGCAATGGGG CGAGCGCCCG GAAGACGCCT GCCTGCTGGA CTACGACCTT
GACGCCAGCC CTCGCGAGGC CGGCGCATCC GACCAGGCGG TGATCCGCCT GGATGGCATC
TGCACGCCCG AACCGGAGGC ACCATGA
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| Protein sequence | MFCRVDFRRA HMAPLALGSL ALAVTGLAGA EQYRFDDNLL LGSGLAGGSL ERFNRANQVD
PGSYHVDIYL NGSYASRARV EFRSRNDGVE PCFSERFLRQ TLGAHAVPNT DGNDRQACQG
LLERLPGSTF TLDTARLRLD LSVPQALLDL KPRGYVSPDE WDAGSTMGFV NYDASLYRSS
FDGAGNGHSD YGYLGLSGGI NLGLWRLRHQ SNYTYSSYAG NTRSDWNSIR TYVQRAVPGL
RSELTLGESY TEGNLFGSLG YRGVRLASDD RMLPESQRRY APQVRGTANS NARVVISQNG
KKIHEAVVAP GPFVIDDLYG TAYDGDLDVQ VIEADGSVSR FSVPFSAVPE SMRPGISRYA
ATLGQARQYG DGNDLFGDFT YQRGLTNALT ANLGARMAED YLALLGGGVF ATRYGAFGLN
TTFSSATVEN GQRKQGWRVG LNYSRTFQPT QTTLTLAGYR YSTEGYRDLG DALSARHADQ
RHDTWNSSSY KQRNQFTVLV NQGLGEYGNL YLSGATSDYY DGKSRDTQLQ FGYSNTWRRL
SYNLAYSRQQ TTWYRDLDND YDPSLPPQYN LRRGSERNDT LTLTLSLPLG SSSRAPNLSA
MASRRSGDSR GSSYQTGLNG TLGEDRSLSY AINAGRDSQA RGTDFNGSLQ KQTAVATVNA
GYAESASYRQ LNAGLRGAAV LHRGGLTLGP YVGDTFALIE AKGASGAGVR GGQGARVDGN
GYAVVPSLSP YRYNPVSLDP QGMGETAELV ETERKIAPYA GAAVHVRFKT LTGHPLLIQA
QLPDGGALPL GADVLDRRGV TIGMVGQGGQ VYARAEGDQG RLRVQWGERP EDACLLDYDL
DASPREAGAS DQAVIRLDGI CTPEPEAP
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