| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2974 |
|---|
| Symbol | |
|---|
| ID | 5356191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3062928 |
|---|
| End bp | 3064247 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640812025 |
|---|
| Product | putative cytochrome c precursor |
|---|
| Protein accession | YP_001348334 |
|---|
| Protein GI | 152983634 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.34008 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGA CAGCCTTGCT CGCCCTCTCC GTCCTCGCCT GCGGCATCGC CCAGGCCGCC
GAGGCGCCGG ACCCGGCCCT GATCAGGCAG GGCGAATACC TGGCCCGCGC CGGCGATTGC
GTGGCCTGCC ACACCGCCAG GGACGGCAAG CCGTTCGCCG GGGGCCTGCC GATGGAAACG
CCGATCGGTG CGGTGTACTC GACCAACATC ACCCCGGACC GCAAGACCGG CATCGGCGAC
TACAGCTTCG AGGACTTCGA CCGCGCCGTG CGCCACGGCG TGGCCAGGTC CGGCGACACG
CTCTACCCGG CGATGCCCTA CCCGTCCTAC GCACGAGTCA GCGAAGCGGA CATGCGCGCC
CTCTACGCCT ACTTCATGCA TGGCGTGGAG CCGGTGGAGC AGCCCAACAA GGCCAGCGAC
ATCCCCTGGC CGCTGTCGAT GCGCTGGCCG CTGGCGTTCT GGCGCTGGAC CTTCGCTCCC
GAAGTGAAGG ACTTCCAGGC CGCCGCCGGG CAGGACCCGG TGCTGGCGCG CGGCGCCTAC
CTGGTCGAAG GCCTTGGCCA CTGTGGCGCC TGCCATACCC CACGTGGGCT GGGCATGCAG
GAGAAGGCCC TGGCGGCGAG CGATGGCGCG GCCTACCTGT CCGGCAGCGC GCCGCTGGAG
AACTGGATCG CCAAGAGCCT GCGCGGCGAC CACCGGACCG GACTGGGCAG CTGGAGCGAA
GCCGACCTGG TCAGCTTCCT GCGTACCGGC CGCAGCGAGC GCAGCGCGGT GTTCGGCGGC
ATGTCCGACG TGGTGGTGCA CAGCATGCAG TACATGACCG ACGCCGACCT CACCGCCATC
GCCCGCTACC TCAAGTCGCT GCCGCCAGCG GACCCCGCCG ACCAGCCGCA CGTCTACGAC
GAGAGCGTGG CCCAGGCGCT ATTCCACGGC GACGACAGCA AGACCGGCGC GGCGCTCTAC
GTCGACAACT GCGGGGCCTG CCACCGCACC GACGGCAAGG GCTATGCGCG GGTCTTCCCG
GCCCTGGCCG GCAACCCGGT AGTGACCGGC GGCGACCCGA CCTCCCTGGT GCACATCGTG
CTCAAGGGCG GCTCCCTGCC GGCCACCCAC CAGGCACCGT CGAGCTTCAC CATGCCGCCG
TTCGGCTGGC GGATGAACGA CCAGGAGATC GCCGACGTGG TCAACTTCAT CCGCACCAGC
TGGGGCAACC AGGCGCCGAG CGTCAGCGTC GACGAGGTCA AGCGCCTGCG CAAGGCCACC
GGCGCGGCGG CGGTGGGCGA CATTCCGCCG CCGGGACCGG CCGCGGCGGA TCGCGGCTGA
|
|---|
| Protein sequence | MKPTALLALS VLACGIAQAA EAPDPALIRQ GEYLARAGDC VACHTARDGK PFAGGLPMET
PIGAVYSTNI TPDRKTGIGD YSFEDFDRAV RHGVARSGDT LYPAMPYPSY ARVSEADMRA
LYAYFMHGVE PVEQPNKASD IPWPLSMRWP LAFWRWTFAP EVKDFQAAAG QDPVLARGAY
LVEGLGHCGA CHTPRGLGMQ EKALAASDGA AYLSGSAPLE NWIAKSLRGD HRTGLGSWSE
ADLVSFLRTG RSERSAVFGG MSDVVVHSMQ YMTDADLTAI ARYLKSLPPA DPADQPHVYD
ESVAQALFHG DDSKTGAALY VDNCGACHRT DGKGYARVFP ALAGNPVVTG GDPTSLVHIV
LKGGSLPATH QAPSSFTMPP FGWRMNDQEI ADVVNFIRTS WGNQAPSVSV DEVKRLRKAT
GAAAVGDIPP PGPAAADRG
|
|---|
| |