| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2934 |
|---|
| Symbol | |
|---|
| ID | 5358760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3021354 |
|---|
| End bp | 3022589 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640811985 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001348294 |
|---|
| Protein GI | 152985464 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAC TGGAAAAGAA CGCCGCCGAT CCCTATCGGC AACCGCTGCC ACGGACCCCG
GCCCGGCGCA TCGCCGACGA CGCCGAGGCG ATCCGCGTCG CCCGCGAACT GGCCGGGCTG
TTCGCCGAGG AAGCCTCGCT GCGCGACCGC CAGCGCCGGC TGCCGGTGGC CGAACTGGAA
GCCTTCTCGC AGAGCGGCCT ATGGGGCATC AGCGTACCGC GCGCCTACGG CGGCGCCGAG
GTCGACTACC GGACCCTGGC CGAAGTACTG AAGACCATCG CCGCGGTAGA CCCGTCCCTG
GCGCAGTTGC CGCAGAACCA CCTGGCGGTG CTCGACCATT TGCGCCTGGA CGGCAGCGAG
GAGCAGAAAC GCTTCTTCTA CGGCCTGGTG CTAGACGGCG TGCGCTTCGG CAACGCCTTC
TCCGAACGCC ACAGCCGTAC CGTCGCCGAA TTCCAGACAC GAGTGCTGGC GGATGGCGAC
GGGTTCCGCA TCGACGGCCG CAAGTTCTAT TCGAGCGGCG CCCTGCTCGC CCACTGGGTA
CCGGCCGTCG GCCTCGACGC CGAGCAGCGC GCGCACCTGG CGTTCATCCC GCGCGACGCG
CCGGGGCTGA CGGTGATCGA CGACTGGTCC GGCTTCGGCC AGCGCACCAC CGCCAGCGGC
ACCGTCATCC TGGACAACGT GCGGGTGCCG GCCGAGCACG TCATCCCGGT GCACCGCGCC
TTCGACCGCC CCACCGCCGC CGGCGCCGTA TCGCAGTTCA TCCAGGCCGC CATCGACGCC
GGCATCGCCC GTGGCATCCT CGCCGAGACC GTGCAGCAGG TGCGCCGCCA CGCGCGGCCA
TGGATAGACG CCAACCAGCA GCATGCCTGG GAAGACCCCT ACACCATCCA GCAGGTCGGC
GACCTGCGCA TCCGCGTGCG CGCCGCGGAA GCCGTGCTCG ACCTGGCGGC CGACGCCATC
GAAGCGGCGC TCGCCGCCCC CGACGAGGAG AGCGTGGCCG CCGCCTCGAT CGCGGTGGCC
GAGGCCAAGG TGCTCACCAC CGAAGCCGCC CTGCTCGCCG CCAACCGGCT GTTCGAACTG
GCCGGCACGC GCTCGACCCT GGAGGAACTC AATCTTGACC GCCACTGGCG CAACGCCCGC
ACCCACACCC TGCATGACCC GGTGCGCTGG AAATACCATG CCATCGGCAA CTACCAGTTG
AATGGGGTGA AGCCCCCGCG GCACGCCTGG CTCTAG
|
|---|
| Protein sequence | MSALEKNAAD PYRQPLPRTP ARRIADDAEA IRVARELAGL FAEEASLRDR QRRLPVAELE
AFSQSGLWGI SVPRAYGGAE VDYRTLAEVL KTIAAVDPSL AQLPQNHLAV LDHLRLDGSE
EQKRFFYGLV LDGVRFGNAF SERHSRTVAE FQTRVLADGD GFRIDGRKFY SSGALLAHWV
PAVGLDAEQR AHLAFIPRDA PGLTVIDDWS GFGQRTTASG TVILDNVRVP AEHVIPVHRA
FDRPTAAGAV SQFIQAAIDA GIARGILAET VQQVRRHARP WIDANQQHAW EDPYTIQQVG
DLRIRVRAAE AVLDLAADAI EAALAAPDEE SVAAASIAVA EAKVLTTEAA LLAANRLFEL
AGTRSTLEEL NLDRHWRNAR THTLHDPVRW KYHAIGNYQL NGVKPPRHAW L
|
|---|
| |