| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2888 |
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| Symbol | |
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| ID | 5356630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 2968090 |
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| End bp | 2970096 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640811939 |
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| Product | hypothetical protein |
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| Protein accession | YP_001348248 |
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| Protein GI | 152985590 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.882104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAGC ACACCGACAC CACTTCCAGC CTTTCCTTGA CGGCGTCGGC GCTCACGGAA
CTCTATCCGC GGGCCATTGC TGGACAGGAG GCGCTGAACG ATCTCGCAAA TCTGCTAGTC
CTGGGCTTTG CCAACACTCC GCTCACCTTG GCTAACGCCG TAATCACCCA CATCACCACC
ACCCTCCACA ACGACTCACA GTCCCGCCCG CTCGACGCCC TCATCGCCGA AATCCACCAA
CTGCCCGCCG ACGCTACCGC CGACCGCTAT CAACTCGTCC TCCGCCCCTG GCTCTGGTGG
CTGACCCTGG CCAGCAACAA CCGCGTATTC CAGAATCTCG CCACCAGCGA CATCGTCACC
ACGATCTTCA AGGCCCACGG CTTCACCGAC TTCAAGCTGT CGCTGACCGG CAGCTACGAG
CCCCGTGAAT ACTGCGTGCA GTACGGCGAG ACCGACTTCG CCTTCGTCTC GCGCCTGCTG
GAGGAGGAAG GCATCTTCTG GTTCTTCACC CACGAAGAGG GCAAGCACAC GCTGGTGCTG
GCGGACAACA ACGATGCCTT CCCGCCCATC CCCAACGGGC CCAAGGTGCC GTACCTGGGC
CAGGAAATCG GCGTGCGCGA GTTGCACGGC ATCCGTTCGG CGCAGTACTG CCTGCAGGCG
GTGGCCGGGA CCTACAGTGC CACCGACTAC GAGTTCACCA CGCCCACCAC TTCGCTCTAT
TCCCAGGCCC AGGCGGAAGC AGGGCCACGC GCGCAATACG AACACCCCGG GGGCTATACC
GCCAAGGCGC GGGGCGATGC GCTGACCAAG CAGCGCGTGG ACGGCCTGCG CAGCCAGGAG
AAGCGGCTGA TCGGCGAGAG CGACTGCCGC TGGCTGGTGC CGGGGCACTG GTTCACCCTG
ACCGGACATG ACGACGCCAG CCTGAACATC GACTGGGTGC TGACCTCGGT GACCCACGAG
GCCGACCACG GGCACTACCG CAACCGCTTC GAGGCCATCC CCAAGGCCAC CGCCTACCGC
CCTCCCCGCA CCACGCTCAA GCCACGCATG CACACTCAGA CCGCCAAAGT GGTGGGCAAG
GCCGGCGAGG AGATCTGGAC CGACCAGTAC GGCCGGATCA AGCTCCAGTT CCCCTGGGAC
CGCGACGGCA AGAACGACGA GACCTCGTCG TGCTGGGTGC GCGTGGTGCT GCCCTGGAGC
GGCAAGGGCT TCGGCATGCA GTTCGTGCCA CGCATCGGCC AGGAAGTGAT CGTCACCTTC
ATCGACGGCG ACCCGGACCG CCCGCTGGTC ACCGGCTGCG TCTACAACGG CGACAACGCC
CTGCCCTATG CGCTGCCGGA CAACCAGACG CAATCCGGCA TCAAGACCAA CTCGTCGAAG
GGCGGCGGCG GTTTCAACGA GCTGCGTTTC GAGGACAAGA AGGACGCCGA GGAGGTCTTC
CTCCAGGCGC AGAAGGACCT CAACGTCAAC GTGCTCAACG ACAGCACCGC CAGCATCGGC
CACGACGAGA CCCTGACGGT GCAGAACGCC CGCACCCGCA CGGTGAAGGA AGGCGACGAA
ACCGTCACCC TGGAGAAAGG CAAGCGCACG GTGACCATCC AGACCGGCAG CGACAGCCTG
GATGTGAAGG AAACGCGCAC GGTGACGGTG GGCGCCGACC AGACCCACAG CACCGGCGGC
AACTACAGCC ACCAGGTCAG CGGCGACTTC GAGCTGACGG TGGACGGCAA CCTGACCATC
AAGGTCAGCG GCACCCTCGC CCTGCAAAGC GGCGGCAGCC TGACCCTGAA GAGCGACGCC
GACCTCGTCG CCCAGGCCGG CACCTCGCTG ACCAGCAAGG CCGGGACGTC GCTGACCAAC
CAGGCCGGCA CCTCGCTCAC CAACAAGGCC GGCACCAGCC TGACCAACGA TGCCGGCGTC
AGCCTGACCA ACAAGGCCGG CGCCGAACAG ACGGTGGACG GCGGCGGCAT GCTGACCCTC
AAGGGCGGCC TGGTAAAGGT CAACTGA
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| Protein sequence | MPQHTDTTSS LSLTASALTE LYPRAIAGQE ALNDLANLLV LGFANTPLTL ANAVITHITT
TLHNDSQSRP LDALIAEIHQ LPADATADRY QLVLRPWLWW LTLASNNRVF QNLATSDIVT
TIFKAHGFTD FKLSLTGSYE PREYCVQYGE TDFAFVSRLL EEEGIFWFFT HEEGKHTLVL
ADNNDAFPPI PNGPKVPYLG QEIGVRELHG IRSAQYCLQA VAGTYSATDY EFTTPTTSLY
SQAQAEAGPR AQYEHPGGYT AKARGDALTK QRVDGLRSQE KRLIGESDCR WLVPGHWFTL
TGHDDASLNI DWVLTSVTHE ADHGHYRNRF EAIPKATAYR PPRTTLKPRM HTQTAKVVGK
AGEEIWTDQY GRIKLQFPWD RDGKNDETSS CWVRVVLPWS GKGFGMQFVP RIGQEVIVTF
IDGDPDRPLV TGCVYNGDNA LPYALPDNQT QSGIKTNSSK GGGGFNELRF EDKKDAEEVF
LQAQKDLNVN VLNDSTASIG HDETLTVQNA RTRTVKEGDE TVTLEKGKRT VTIQTGSDSL
DVKETRTVTV GADQTHSTGG NYSHQVSGDF ELTVDGNLTI KVSGTLALQS GGSLTLKSDA
DLVAQAGTSL TSKAGTSLTN QAGTSLTNKA GTSLTNDAGV SLTNKAGAEQ TVDGGGMLTL
KGGLVKVN
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