Gene PSPA7_2870 details

Gene Information

• Locus tag: PSPA7_2870
• ID: 5356124
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 2949044
• End bp: 2951035
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640811921
• Product: putative ABC transporter ATP-binding protein/permease
• Protein accession: YP_001348230
• Protein GI: 152986401
• COG category: [V] Defense mechanisms
• COG ID: [COG0577] ABC-type antimicrobial peptide transport system, permease component; [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.876991
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAACG CCAAGCAGCC CGTCCCTCTG ATCGAACTGC GCGACATCCG CAAGCGCTAC 
GGCGGCAACG GCACTCCGGA AGTCGAAGTA CTCAAGGGCG TATCGCTGTC GATCCACGCC 
GGCGAGTTCG TCGCCATCGT CGGCGCCTCC GGCTCCGGCA AGTCGACCCT GATGAACATC 
CTCGGCTGCC TCGACCGGCC CAGCTCCGGC AGCTACCACT TCGCCGGCCA CGACGTCGCC 
GAACTGGACA GCGACGAGCA GGCCTGGCTG CGCCGCGAGG CGTTCGGCTT CGTGTTCCAG 
GGCTATCACC TGATCCCCTC CGCCTCGGCC CAGGAGAACG TCGAGATGCC GGCGATCTAC 
TCCGGCACCC CGGCGAGCGA GCGACACACC CGTGCGCGGG CCCTGCTCGA ACGCCTGGGC 
CTGGCCGAGC GCACCGGCAA CCGTCCGCAC CAGCTGTCCG GCGGCCAGCA GCAACGGGTC 
TCGATCGCCC GCGCGCTGAT GAACGGCGGC CATATCATCC TCGCCGACGA GCCCACCGGC 
GCCCTCGACA GCCACAGCGG CGCGGAAGTC ATGGCGCTGC TCGACGAACT GGCCGGCCAG 
GGCCACGTGG TGATCCTGAT CACCCACGAC CGCGACGTCG CCGCCCGCGC CAAGCGCATC 
ATCGAGGTGC GCGACGGCGA GATCGTCAGC GACAGCGCCA ACGACGACCG CCCGGCGCAC 
CCGAGCGCCG GCGTCGGGCG CCACCTGCAG GCCGACGATC TCAGCCAGCG CCTCGCCGAG 
GGCAGCAGCG AACCCTCTGG GGCCTGGCGC GCCGAACTGC TGGAGGCGGT GCGCGCCGCC 
TGGCGGGTGA TGTGGATCAA TCGGTTCCGC ACCGCGCTGA CCCTGCTCGG GATCATCATC 
GGCGTCGCCT CGGTGGTGGT CATGCTCGCC GTCGGCGAGG GCAGCAAGCG CCAGGTGATG 
GCGCAGATGG GCGCGTTCGG CTCGAACATC ATCTATCTCA GCGGCGACTC GCCGAACCCG 
CGCGCGCCGA TGGGCATCGT CAGCAGCGAC GACGTCGCCG CCATCGCCAC CCTGCCCCAG 
GTGAAGAAGG TCATGCCGGT GAACGGCGGC AAGCTGGTGG TGCGCTACGG CAACATCGAC 
TACCACGCCT ACGTCGGTGG CAACAACACC GACTTCCCGG AAATCCTCAA CTGGCCGGTG 
GCCGAGGGCA GTTACTTCAC CGAACGCGAC GAGGCCGCCG CCACCACGGT CGCGGTGATC 
GGCTACAAGG TGCGCAAGAA GCTGTTCGGC AGCGCCAGCC CGATCGGCCG CTACATCCTC 
ATCGAGAACG TGCCGTTCCA GGTCATCGGC GTGCTCGCCG AGAAAGGCTC CAGCTCCGGC 
GACCAGGACG CCGACAACCG CATCGCCATC CCCTACTCCG CCGCCAGCAT CCGCCTGTTC 
GGCACGCGCA ACCCCGAGTA CGTGATCATC GCCGCCGCCG ACGCCCAGCG CGTGCACCAG 
GCCGAGCGCG CCATCGACCA GTTGATGCTG CGCCTGCACC GCGGCCAGCG CGACTACGCG 
CTGACCAACA ACGCGGCGAT GATCCAGGCC GAGGCGGCGA CCCAGAACAC CCTGTCGCTG 
ATGCTCGGCT CGATCGCCGC GATCTCCCTG CTGGTGGGCG GGATCGGGGT GATGAACATC 
ATGCTCATGA CCGTGCGCGA GCGCACCCGT GAGATCGGCA TCCGCATGGC CACTGGCGCC 
CGCCAGGGCG ATATCCTCCG CCAGTTCCTC ACCGAGGCGG CGATGCTCTC GGTGGTCGGC 
GGCCTGGCCG GGATCGCCCT GGCCTTGAGC ATCGGCGGCA TGCTGCTGCT CGGCCAGGTC 
GCGGTGGCCT TTTCCCTGTC GGCCATCGTC GGCGCCTTCG GCTGTGCGCT GGTCACCGGC 
CTGGTGTTCG GCTTCATGCC GGCGCGCAAG GCCGCCCAGC TGGACCCGGT GGCCGCCCTG 
GCCAGCCAAT GA 

 

Protein sequence

MENAKQPVPL IELRDIRKRY GGNGTPEVEV LKGVSLSIHA GEFVAIVGAS GSGKSTLMNI 
LGCLDRPSSG SYHFAGHDVA ELDSDEQAWL RREAFGFVFQ GYHLIPSASA QENVEMPAIY 
SGTPASERHT RARALLERLG LAERTGNRPH QLSGGQQQRV SIARALMNGG HIILADEPTG 
ALDSHSGAEV MALLDELAGQ GHVVILITHD RDVAARAKRI IEVRDGEIVS DSANDDRPAH 
PSAGVGRHLQ ADDLSQRLAE GSSEPSGAWR AELLEAVRAA WRVMWINRFR TALTLLGIII 
GVASVVVMLA VGEGSKRQVM AQMGAFGSNI IYLSGDSPNP RAPMGIVSSD DVAAIATLPQ 
VKKVMPVNGG KLVVRYGNID YHAYVGGNNT DFPEILNWPV AEGSYFTERD EAAATTVAVI 
GYKVRKKLFG SASPIGRYIL IENVPFQVIG VLAEKGSSSG DQDADNRIAI PYSAASIRLF 
GTRNPEYVII AAADAQRVHQ AERAIDQLML RLHRGQRDYA LTNNAAMIQA EAATQNTLSL 
MLGSIAAISL LVGGIGVMNI MLMTVRERTR EIGIRMATGA RQGDILRQFL TEAAMLSVVG 
GLAGIALALS IGGMLLLGQV AVAFSLSAIV GAFGCALVTG LVFGFMPARK AAQLDPVAAL 
ASQ