| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2772 |
|---|
| Symbol | |
|---|
| ID | 5358752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2795525 |
|---|
| End bp | 2797909 |
|---|
| Gene Length | 2385 bp |
|---|
| Protein Length | 794 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640811823 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001348132 |
|---|
| Protein GI | 152986819 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.600395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGCGG CCCTGCTGTC GCTGGCCATG GCGGCCGGCG CGGCGCCGCT CTGCGCCTCG
GCCGCCGAGG TAGTGGCGGA GCGGGCGCGG CCCTATGCGA TCCCCGCTGG GGAGCTGGGC
GAGGTGCTCA ACCGCTTCGC CCGCGAGGCC GGCATCACCC TCTCGGCCAC TCCGGCGCAG
ACCGGTGGCT ACAGTTCCCA GGGGTTGCGC GGCAGTTTCA CCGTGCAGCA GGGCCTGGCC
CGGCTGCTCG CCGACACCCC GCTGGAAGCG GAAGACCAGG GCGACGGCAG CTTCGTCCTG
CGCGAGGCGC CGGCGAAGGA CGGCGACGTG CTGAACCTGC AGGCGGTGGA AGTCTTCGCC
CTCGGCAACA ACCTGGGCAG CACCGATGGC TACCTGGCCA CCCATAGCCA GATCGCCACC
AAGACCAGCA AGCCGCTGCT GGAAACCAGC CAGACCGTCT CGGTGATCAC CCGCGAGCAG
ATCGACGACA CCGCCTCCAG GACCGTGCAG CAGGCGATGC GCTATACCCC CGGGATCTTC
ACCGGCCAGG TCGGCGCCTC GAACCGCTAC GACTACGTGG TGATGCGCGG CTTCGCCGAC
AACAGCGTGG ACAACATCTA CCTCGACGGC CTCAAGGCCA TGGGCGATAG CGGTACCTAC
AGCTCGATGC AGGTCGACCC GTACTTCCTC GAGCGCATCG ACGTGCTCAA GGGGCCGTCC
TCGGTGCTCT ACGGCCGCAG CCTGCCGGGC GGGCTGGTGG CGCTGACCAG CAAGAAGCCG
CTGTACGAGG ACTACCACCA GGTCACCGCC AGCGTCGGCA ACATGGGCCA GAAGTCGATG
GGCTTCGACT TCAGCGGCCC GCTGGACGAG GAGAAGCGCA TCGCCTACCG CGTGGTCGGT
CTCGGCAAGG GCTCGGATAC CCAGTTCGAC CACGTCAAGG AAGAGCGCTA CGCCATCGCC
CCGACCCTGG CCATCGATTT CAGCGACGAC ACCACCCTGA CCCTGCAGGG CTACCTGCAG
CATGATCCGA ATGGCGGCTA CCACGGCGGC GTGCCGGCCG ATGGCACCCT GTCGCACCAC
AACGGCCGGC ACATCTCCCG CGAGTTCTTC GATGGCGAGC CGGGCAAGGA CGACTTCGAC
CGCACCCAGC GGATGTTCGG CTACCAGCTG GAACACCGCA TAGACGACGT CTGGTCGGCG
CGGCAGAACT TCCGCTACCT GGACTCCGAC GTCGACCTTT CACAGGTCTA CGCCTACGGC
TGGAGCGCCA GCGAGCCGAA CAAGCTGAAC CGTTACTTCA CCGGCGCCCG CGAACACCTG
CAGGCATACA TCGTCGACAA CATGCTGCAG GCCGAATTCG CCACCGGTGC GGCGCGCCAC
ACCCTGCTGA CCGGTCTCGA CTACCAGCGC CGGCGCACCG TGGTCGACTG GCGTTCCGGC
GCGGCCTCGG CGCTGGACGC GTTCAACCCG GTCTACGGCG ACGACGCCAT CAGCTACTAC
CCCGACGACA ACCACACCCG GCGCCTGGAG CAGACCGGCG TCTACCTGCA GGACCTGATC
GACATCGACC AGTGGCGCTT CTCGGTCGGC CTGCGCCAGG ACTGGGTCAG CGTCACCGAC
AAGAATCGCA GCAGCGGCAC CAAGGCCGAC GACGACTGGA AGAAATTCAC CGGCCGGATC
GGCGCGCTGT ACCTGTTCGA CAACGGCCTG GCGCCCTATG TCAGTTACTC CGAGTCGTTC
AACCCGAACG CCTACTCCGA CGCTTCCGGT ACGCCGCTGG AACCCACCGA GGGCAAGCAG
TGGGAGCTCG GCCTGAAATT CCAGGCGCCG GGCAGCAACA GCTTCTACAC CGCCTCGCTG
TTCCACATCA CCCAGGAGAA CGTCGCCTCC AAGGAACCCC AGGACAATTT CTACACCTCG
GTCGGCGAAG TGCGTTCCCA GGGGTTCGAA CTGGAGGCCC ACACCCAGCT CAGTGACAAC
CTGAAACTGC TCGGCAGCTA CACCTACACC GATATCACCT ACACCAAGTC GCTGGACGGC
AACCAGGGCC ATACGCCGAA CCAGGCGCCC AAGCACATGG CTTCGCTGTG GGCCGACTAT
GCCTTCGACG CCGGCCCGCT CAGCGGCCTG AGCATCGGCG GCGGCGCGCG CTACGTCGGC
GAGACCTGGG CGGACAAGGA AAACACCTTG CGGGTACCGG ACTACACCCT GGTCGACGCG
CGCATCGGCT ACGACCTCGG CAAGCTCGGC CTGAAAGGCC TGGACGTCAG CCTCAATGCC
AACAACCTGC TGGACAAGGA CTACGTGGCG TCCTGCTACA GCCTGGACTT CTGCTACTTC
GGCGAGAAGC GCAACGTCAC CGCGACGGTG AACTACCAGT TCTGA
|
|---|
| Protein sequence | MRAALLSLAM AAGAAPLCAS AAEVVAERAR PYAIPAGELG EVLNRFAREA GITLSATPAQ
TGGYSSQGLR GSFTVQQGLA RLLADTPLEA EDQGDGSFVL REAPAKDGDV LNLQAVEVFA
LGNNLGSTDG YLATHSQIAT KTSKPLLETS QTVSVITREQ IDDTASRTVQ QAMRYTPGIF
TGQVGASNRY DYVVMRGFAD NSVDNIYLDG LKAMGDSGTY SSMQVDPYFL ERIDVLKGPS
SVLYGRSLPG GLVALTSKKP LYEDYHQVTA SVGNMGQKSM GFDFSGPLDE EKRIAYRVVG
LGKGSDTQFD HVKEERYAIA PTLAIDFSDD TTLTLQGYLQ HDPNGGYHGG VPADGTLSHH
NGRHISREFF DGEPGKDDFD RTQRMFGYQL EHRIDDVWSA RQNFRYLDSD VDLSQVYAYG
WSASEPNKLN RYFTGAREHL QAYIVDNMLQ AEFATGAARH TLLTGLDYQR RRTVVDWRSG
AASALDAFNP VYGDDAISYY PDDNHTRRLE QTGVYLQDLI DIDQWRFSVG LRQDWVSVTD
KNRSSGTKAD DDWKKFTGRI GALYLFDNGL APYVSYSESF NPNAYSDASG TPLEPTEGKQ
WELGLKFQAP GSNSFYTASL FHITQENVAS KEPQDNFYTS VGEVRSQGFE LEAHTQLSDN
LKLLGSYTYT DITYTKSLDG NQGHTPNQAP KHMASLWADY AFDAGPLSGL SIGGGARYVG
ETWADKENTL RVPDYTLVDA RIGYDLGKLG LKGLDVSLNA NNLLDKDYVA SCYSLDFCYF
GEKRNVTATV NYQF
|
|---|
| |