| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2609 |
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| Symbol | |
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| ID | 5354604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 2629589 |
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| End bp | 2630617 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640811660 |
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| Product | HTH-type transcriptional regulator VqsM |
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| Protein accession | YP_001347972 |
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| Protein GI | 152984802 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.518674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGT CCGAGAACAT CCAGTACGAC TTCGAGTGGC GACCACTCAG CAACTACCTC
GCCGTGCAAC GCATCGTCCC GCCGGACCTC CACCAGCCCC TCGGAACCGT CCCCCGATTG
CCCAGCGAGG CGCTCTACGA ATGGATAGTC CTGAATGCCC GTTCGCCCCT GGAAGGACTC
AGCCTGGGAG AGCACTACCG CCTTTCCGAC TACGGCGTCG CGGGCCTGGC CCTGCAAAGC
GCCGGCACCG TGGCAGAAGC CCTGCAACTG GTCAGGACCA ACATGCTGCT GTTCAACCGG
GACGTCAGCG GCATCGAGGT GAAACGCTCC AGTTGCGATA CCGTCGACGT GGACATCCAT
CTGCAGACCA GACCGGACTG GCCGGCGCCG GCACGCATCT ATCATGCGAA TGTCCTGGCG
TCGGCGGCCT ACGCGCTGTT CCGCGACCTG CTGCTGGGCG ACCTGGAACT GGTCCGTCTG
CGCTTGCCGG AGCGACCCGG CGAGGCAACG CCATACGAGG AATATTTTCG GGTACCGGTG
TATTTCGCTG GCGCGGGCAT CACCTTCACT CTTCCGGCGG ATCTGCTCGA AACCCGCATC
GCCACCGCCA ACGCCGCGGT CTTCCAGGCC TCCCTGGCGC TCAGCAGCGA AACCTTCAAC
ATCCGGGTCG CCCGGGAAAT GGGCGGTTAC CGGCAGCGCA TCGTGTCGCT GCTGGAGTCG
CTGCAGGACC GCTATCCGAA CATTGCCTGG GTCGCCCGAC AATTGAGGGT CACCGAAAGA
ACGCTGCGCC GGCGGCTCGC CGAAGAGGGC ACGACCTACA GGGCGGTGCT CGACCTGGTA
CGCCGGGACA GGGCCCGGCA ACTGCTCCGG AACGAATGCC TGCGCATCGA GGATATCGCC
GAGAGACTCG GCTACATGGA CACCTCCAGC TTTCGCCATG CCTTCCGTCG CTGGACGGGA
CAATGTGCCA ACGATTATCG CCAGGATCAC ACCCAGCCCC GGGCAGTGCG CCGCAAGGGC
GAGCGCTGA
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| Protein sequence | MSQSENIQYD FEWRPLSNYL AVQRIVPPDL HQPLGTVPRL PSEALYEWIV LNARSPLEGL
SLGEHYRLSD YGVAGLALQS AGTVAEALQL VRTNMLLFNR DVSGIEVKRS SCDTVDVDIH
LQTRPDWPAP ARIYHANVLA SAAYALFRDL LLGDLELVRL RLPERPGEAT PYEEYFRVPV
YFAGAGITFT LPADLLETRI ATANAAVFQA SLALSSETFN IRVAREMGGY RQRIVSLLES
LQDRYPNIAW VARQLRVTER TLRRRLAEEG TTYRAVLDLV RRDRARQLLR NECLRIEDIA
ERLGYMDTSS FRHAFRRWTG QCANDYRQDH TQPRAVRRKG ER
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