| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2585 |
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| Symbol | cspD |
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| ID | 5354248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 2608681 |
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| End bp | 2608953 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640811636 |
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| Product | cold shock domain-containing protein CspD |
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| Protein accession | YP_001347949 |
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| Protein GI | 152988646 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.169981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCAGCG GTAAGGTCAA GTGGTTCAAC AACGCCAAGG GCTACGGGTT CATCCTGGCC
GAGGGCCGAG ATGAGGACCT GTTCGCCCAT TACTCGGCCA TTCAGATGGA CGGTTACAAG
ACACTCAAGG CGGGCCAGCC GGTCAATTTC GAGATCATCC AGGGACCGAA GGGACTGCAC
GCCATCAACA TCAGTCCCGC CACCGCGACA ACCGCCGCAT CCTCCGCCCC CACCCCGCTC
GAGGAGCCCC AGGCGTCGCC GATCGAAGCC TGA
|
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| Protein sequence | MLSGKVKWFN NAKGYGFILA EGRDEDLFAH YSAIQMDGYK TLKAGQPVNF EIIQGPKGLH
AINISPATAT TAASSAPTPL EEPQASPIEA
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