| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2200 |
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| Symbol | holB |
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| ID | 5354599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 2254135 |
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| End bp | 2255121 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640811253 |
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| Product | DNA polymerase III subunit delta' |
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| Protein accession | YP_001347572 |
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| Protein GI | 152984685 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.825547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA TCTATCCCTG GCAGCAGGCG CTCTGGAGCC AACTGGGCGG CCGTGCCCGG
CACGCCCACG CCTATCTGCT CTACGGTCCC GCCGGGATCG GCAAGCGCGC CCTGGCCGAG
CACTGGGCCG CCCAGTTGCT CTGCCAGCGG CCCGCCGCCG CTGGCGCATG CGGCGAGTGC
AAGGCGTGCC AGTTGCTGGC CGCCGGTACC CATCCGGACT ACTTCGTGCT GGAGCCGGAG
GAGGCGGAGA AGCCGATCAG GGTCGACCAG GTCCGCGACC TGGTTGGCTT CGTGGTGCAG
ACCGCGCAAC TGGGCGGACG CAAGGTGGTA TTGCTCGAGC CCGCCGAGGC GATGAACGTG
AATGCCGCCA ACGCCCTGCT GAAAAGTCTC GAAGAGCCGT CGGGCGATAC CGTGCTGTTG
CTGATCAGCC ACCAGCCCAG CCGCCTGTTG CCGACCATCA AGAGCCGCTG CGTGCAGCAG
GCCTGCCCTT TGCCGGGCGC GGCGGCGAGT CTGGAATGGC TGGCGCGGGC GCTGCCCGAC
GAGCCGGCCG AGGCCCTGGA GGAACTGCTG GCGCTTTCCG GCGGCTCGCC GCTCACCGCC
CAACGCCTGT ACGGCCAGGG TGTGCGCGAG CAGCGCGCGC AGGTGGTCGA CGGGGTGAAG
AAGCTGCTCA AGCAGCAGAT CGCCGCCAGT CAGCTAGCCG AAAGCTGGAA CGGCGTGCCG
TTGCCGTTGT TGTTCGACTG GTTCTGCGAC TGGACGCTGG GCATCCTGCG CTACCAGCTG
ACCCGTGACG AGGAAGGACT GGGCCTGGCC GACATGCGCA AGGTGGTCCA GTACCTGGGC
GACAAGTCCG GGCAGGCCAA GGTGCTGGCC ATGCAGGACT GGCTGCTGCA GCAGCGGCAG
AAAGTGCTGA ACAAGGCCAA CCTCAACCGT GTGCTGCTTC TCGAAGCCCT ACTGGTGCAG
TGGGCAAGCC TGCCCGGGCC GGGCTAG
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| Protein sequence | MADIYPWQQA LWSQLGGRAR HAHAYLLYGP AGIGKRALAE HWAAQLLCQR PAAAGACGEC
KACQLLAAGT HPDYFVLEPE EAEKPIRVDQ VRDLVGFVVQ TAQLGGRKVV LLEPAEAMNV
NAANALLKSL EEPSGDTVLL LISHQPSRLL PTIKSRCVQQ ACPLPGAAAS LEWLARALPD
EPAEALEELL ALSGGSPLTA QRLYGQGVRE QRAQVVDGVK KLLKQQIAAS QLAESWNGVP
LPLLFDWFCD WTLGILRYQL TRDEEGLGLA DMRKVVQYLG DKSGQAKVLA MQDWLLQQRQ
KVLNKANLNR VLLLEALLVQ WASLPGPG
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