| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2185 |
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| Symbol | |
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| ID | 5356605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 2239122 |
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| End bp | 2242343 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640811238 |
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| Product | ribonuclease E |
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| Protein accession | YP_001347557 |
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| Protein GI | 152988059 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0610467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGATCG CCGTTTCCGG TAGCCCCGGA AACCATTGGT ACTACATGAA AAGAATGCTG
ATCAACGCGA CTCAACCCGA AGAGTTGCGT GTTGCACTGG TCGACGGCCA ACGCCTGTTC
GACCTCGACA TCGAGTCGGG CGCCCGCGAG CAGAAGAAGG CCAACATCTA CAAGGGCCGT
ATCACTCGCG TCGAACCCAG CCTCGAAGCC GCCTTCGTCG ACTTCGGCGC CGAACGCCAC
GGCTTCCTCC CCCTCAAAGA AATCTCCCGC GAATACTTCA AGAAATCCCC CGAAGGCCGG
ATCAACATCA AGGAAGTCCT GAGCGAAGGC CAGGAAGTCA TCGTTCAGGT CGAGAAGGAA
GAGCGCGGCA ACAAGGGCGC CGCCCTGACC ACCTTCATCA GCCTGGCCGG CCGCTACCTG
GTGCTGATGC CGAACAACCC GCGCGCCGGC GGCATCTCCC GCCGCATCGA AGGCGAAGAG
CGCAACGAAC TGCGCGAAGC GCTGAACGGC CTCAACGCCC CGGCCGACAT GGGCCTGATC
GTGCGCACCG CCGGCCTGGG GCGCAGCACC GAGGAACTGC AGTGGGACCT CGACTACCTG
CTGCAACTCT GGAGCGCCAT CAAGGAAGCC TCCGGCGAGC GTGGCGCGCC CTTCCTGATC
TACCAGGAAA GCAACGTCAT CATCCGCGCG ATCCGCGACT ACCTACGCCA GGATATCGGC
GAAGTGCTGA TCGACAGCAT CGACGCCCAG GAAGAAGCCC TGAACTTCAT CCGCCAGGTG
ATGCCGCAGT ACGCCAGCAA GGTCAAGCTG TACCAGGACA GCGTCCCGCT GTTCAACCGC
TTCCAGATCG AGAGCCAGAT CGAGACCGCC TTCCAGCGCG AAGTGAAGCT GCCGTCCGGC
GGCTCCATCG TCATCGACCC GACCGAAGCC CTGGTATCCA TCGACATCAA CTCGGCACGC
GCGACCAAGG GCGGCGACAT CGAGGAAACC GCGCTGCAGA CCAACCTGGA AGCGGCCGAG
GAAATCGCCC GCCAGCTGCG CCTGCGCGAC ATCGGCGGAC TGATCGTGAT CGACTTCATC
GACATGACCC CGGCGAAGAA CCAGCGCGCC GTGGAAGAAC GCGTCCGCGA AGCCCTCGAG
GCCGACCGCG CGCGCGTCCA GGTCGGTCGC ATCTCGCGCT TCGGCCTGCT GGAAATGTCC
CGCCAGCGCC TGCGTCCATC CCTCGGCGAG ACCAGCGGCA TCGTCTGCCC GCGCTGCAAC
GGGCAGGGCA TCATCCGCGA CGTCGAGTCG CTGTCGCTGG CCATCCTGCG CCTGATCGAG
GAAGAAGCCC TGAAGGACCG CACCGCGGAA GTCCGCGCCC GCGTTCCGTT CCAGGTGGCC
GCTTTCCTGC TCAACGAGAA GCGCAACGCC ATCACCAAGA TCGAACTGCG CACCCGCGCG
CGCATCTTCA TTCTGCCGGA CGACCACCTG GAAACCCCGC ACTTCGAAGT TCAGCGCCTG
CGCGACGATA GCCCGGAACT GGTCGCCGGC CAGACCAGCT ACGAGATGGC CACCGTCGAG
CACGAAGATG CCCAGCCGGT CAGCTCGACC CGCACCCTGG TCCGCCAGGA GGCCGCGGTC
AAGACCGTCG CGCCGCAGCA ACCCGCCCCG CAGGCCCAGG AGCCGGTCGA GGCGCCCAAG
CCCATGCCCG AGCCGAGCCT GTTCCAAGGC CTGGTGAAGT CGCTGGTCGG CCTGTTCGCA
GGCAAGGAGC AACCGGCCGC CAAGCCTGCC GAGAGCGCCA AGCCGGCCGC CGAGCGCCAG
TCGCGCCAGG ACGAGCGCCG CAACGGCCGC CAGCAGAACC GTCGCCGCGA CGGCCGCGAT
GGCAATCGTC GCGACGAAGA GCGCAAGCCG CGCGAAGAGC GCGCCGAGCG CCAGCCGCGT
GAAGAACGCG CCGACCGCCC GAACCGCGAA GAGCGCAACG AGCGTCGCCG CGAGGAGCGC
GCCGAGCGTC CGAACCGCGA GGAGCGCCAG CCGCGCGAAG CGCGTGAGGA ACGCACCGAG
CGTCCGGCCC GCGAAGAGCG TCAGCCGCGC GAAGGTCGCG AAGAGCGTAG CGAGCGTCGC
CGCGAGGAAC GTGCCGAGCG ACCGGCTCGC GAGGAGCGCC AGCCACGCGA AGGTCGTGAG
GAGCGCGCCG AACGCCCGGT CCGCGAGGAG CGCCAGCCGC GCGAGGAACG CCAGGCCCGT
GACGCCGCGG CGCTGGAAGC CGAAGCGCTG CCCAACGAGG AAGCCCTGGA GCAGGATGAC
CAGGACGATA CCGATGGCGA ACGTCCGCGC CGCCGCTCCC GCGGCCAGCG CCGTCGCAGC
AATCGCCGCG AACGCCAGCG CGAAGTCAGT GGCGAGCAGG AAGGCAGCGA AGCCGCTGAG
AATGGCGCCG CTCCGCTGAA CACCGTGGCA GCCGCCGCGG CCGCCGGCAT CGCTGTCGCC
AGCGAAGCAC AGGAATCCAG CGCGGAGCAG GCTCCGCTCG CCAGCGAAAT CGCGCCCGAA
TCCGCCTCCG AGACTGCGCC GACCGGCGAA GCCAGCGAGA GCAGCGAAAG CGCCGAGGCA
AGCGCCAGTG AAGCCGCCGC GACCGATACC CCGGTCGTCG TCAGCCTGAT CGAGAACGAA
GCCGACCAGA GCACCCTGCT GGTGGCGCAA AGCGCCGAGG AAGCCCTCTC CATCAGCGAA
AGCGTCGAGG CTCGCAGCGT CATCGAGAGC GTTCCGGCAG CGGACACTAC CGAAGAAACC
GCTGCCCCGG CAGCTCCGGC GACCGTCGAA GCGGCACCGA GCGAACCGGC GGTCACCGAG
GAGCCAACCC CGGCCCCAGC GGCGACTCCG GCCAATGCCA CCGGCCGCGC CCTCAACGAT
CCGCGCGAGA AGCGTCGCCT GCAGCGCGAA GCCGAACGCC TGGCACGCGA AGCCGCCGCC
GCGGCCGAGG CAGCAACCCA GGCCATCCCT GCCGCCATCG AGGAAAGCCC TGTCGCAGCC
AGCGAGGCGC CGACTGTCCA GGAAGAGCCC ACGGTCGCCC AGGTGAAAGA GGAAGCCGTC
CAGGCCGAAG CTCCGGCTCA GGAGCAGGCC CAGGAGGCCG TGCAGGCCAG CCCTGAAGCC
TCTAACGAGA CCGAGACCGA GACCGAGACC GAGACCGAGA CCGCCGAAGA AGAGCACGCG
AAAAAGCCCG AGGAAAGCGA AACCTCTCGG CCGCACGCCT GA
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| Protein sequence | MPIAVSGSPG NHWYYMKRML INATQPEELR VALVDGQRLF DLDIESGARE QKKANIYKGR
ITRVEPSLEA AFVDFGAERH GFLPLKEISR EYFKKSPEGR INIKEVLSEG QEVIVQVEKE
ERGNKGAALT TFISLAGRYL VLMPNNPRAG GISRRIEGEE RNELREALNG LNAPADMGLI
VRTAGLGRST EELQWDLDYL LQLWSAIKEA SGERGAPFLI YQESNVIIRA IRDYLRQDIG
EVLIDSIDAQ EEALNFIRQV MPQYASKVKL YQDSVPLFNR FQIESQIETA FQREVKLPSG
GSIVIDPTEA LVSIDINSAR ATKGGDIEET ALQTNLEAAE EIARQLRLRD IGGLIVIDFI
DMTPAKNQRA VEERVREALE ADRARVQVGR ISRFGLLEMS RQRLRPSLGE TSGIVCPRCN
GQGIIRDVES LSLAILRLIE EEALKDRTAE VRARVPFQVA AFLLNEKRNA ITKIELRTRA
RIFILPDDHL ETPHFEVQRL RDDSPELVAG QTSYEMATVE HEDAQPVSST RTLVRQEAAV
KTVAPQQPAP QAQEPVEAPK PMPEPSLFQG LVKSLVGLFA GKEQPAAKPA ESAKPAAERQ
SRQDERRNGR QQNRRRDGRD GNRRDEERKP REERAERQPR EERADRPNRE ERNERRREER
AERPNREERQ PREAREERTE RPAREERQPR EGREERSERR REERAERPAR EERQPREGRE
ERAERPVREE RQPREERQAR DAAALEAEAL PNEEALEQDD QDDTDGERPR RRSRGQRRRS
NRRERQREVS GEQEGSEAAE NGAAPLNTVA AAAAAGIAVA SEAQESSAEQ APLASEIAPE
SASETAPTGE ASESSESAEA SASEAAATDT PVVVSLIENE ADQSTLLVAQ SAEEALSISE
SVEARSVIES VPAADTTEET AAPAAPATVE AAPSEPAVTE EPTPAPAATP ANATGRALND
PREKRRLQRE AERLAREAAA AAEAATQAIP AAIEESPVAA SEAPTVQEEP TVAQVKEEAV
QAEAPAQEQA QEAVQASPEA SNETETETET ETETAEEEHA KKPEESETSR PHA
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