| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2018 |
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| Symbol | |
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| ID | 5356994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 2055586 |
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| End bp | 2058369 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640811071 |
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| Product | hypothetical protein |
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| Protein accession | YP_001347394 |
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| Protein GI | 152988320 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0727508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCGAG AAAAGATATT AAAACCAAGG GATTACACTA TGGTTCGGCT TCGTACACTG
GTTCGGGCAA TCGCGGCGGC CTCGGTCCTG ACTTCCGGCA TGGCGCACGG GTTGGGACTC
GGCGAAATAA CCCTGAAGTC GGCGTTGAAC CAGCCGCTGG ATGCCGAGAT CGAGCTGCTC
GAAGTCCGCG ACCTGAGTTC GGGCGAGGTG ATACCGAGCC TGGCGTCGCC GGAGGAATTC
AGCAAGGCGG GCGTCGATCG CCTGTACTAC CTTACCGACC TGAAGTTCAC CCCGGTGGTG
AAGCCCAACG GCAAGAGCGT CATCCGCGTG ACCTCGTCGA AGCCGGTGCA GGAACCCTAC
CTGAACTTCC TCGTCCAGGT GCTCTGGCCG AACGGCCGCC TGCTGCGCGA ATACACCGTC
CTGCTGGATC CGCCGCTGTA CTCGCCGCAG GCCGCGGCGA GCGCCCCGCA GGCACCGGTC
AGCGCGCCGC GGGCGAGCAA CGCTCCACGT GCCCCGCAGG CACAGGCGCC GGCCCCGGTG
CGGACCACCG CGCCGGCCGG CAGCGAGACC TATCGCACCG TGTCCAACGA CACGCTGTGG
GAGATCGCCC AGCGCAACCG TACCGACCGG GTTTCCGTGC CGCAGGCGAT GCTCGCCTTC
CAGGAACTGA ATCCGGGCGC CTTCGTCGAT GGCAACATCA ACCGGCTGAA GAGCGGCCAG
GTCCTGCGCA TCCCCACCGA ACAACAGATG CTGGAGCGCT CCCCGCGCGA GGCGCTGTCC
CAGGTGCAGG CGCAGAACCA GAGCTGGCGC GGCAGCCGCA ATCCGGCAGC GGCCAGCGCC
GGCGCCCGGC AATTGGACGC GACCCAGCGT AGCGCCGCCG GTTCGGCGCC GGCCAAGGTC
GACGCCCCGG ACAACCTGCG CCTGGTTTCC GGCGAAGGCA AGGCCAGCAA GGGGGCCGAC
AAGGGCGGCA AGGGTGACAG CAAGGCGATC GCCGACACCC TGGCGGTGAC CAAGGAAAGC
CTGGACAGCA CCCGTCGCGA GAACGAAGAA CTGCAGAGCC GCATGCAGGA CCTGCAGAGC
CAGCTGGACA AGCTGCAGAA GCTGATCCAG CTGAAAGACG CGCAGTTGGC CAAGCTGCAG
GGGCAATTGG CTGCCGAAGG CCAGGGCGTA GCCCAGCCGG GCGCGGCCCA GGTGGATGCC
GGCGCCGCTG CGCAAGCTCC CGCCGCCGCA GCGCCGTCCC CGGCTCCCGC CGGCGAGGCG
CCAGCCGCTC CGGCGCAGCC TCCGGTAGCG CCGCCGCCCG CGCCAGCGGC CGAGACCCCG
CCGGCGCCAG CCGCACCGGC CCCGGTACAG ACGGAAGAAC CGGCGGAAGC GAGTTTCCTC
GACGAGTTGC TGGCCAATCC GCTGTGGCTG GCGGTGATCG GCGGTAGCGC GCTGCTGGCC
TTGCTGGTCC TGCTGATGAT TCTGTCCCGG CGCAATGCGC AGAAGGAGAA GGACGAGGCT
GCGGCCCTGG CGGCGGAAGC CGGCGAGGAA CAGGAGGATG CGCTGGACCT GGGAAAGGAC
GGCTTCGACG ACCTGACCCT CGACGAGCCT GAGCCGCAGG TCGCGGCCGT TGCGGCGTCG
GCCGAGAAGA CCACCGCGCA GACTTCCGAT GCGCTGGGCG AGGCCGATAT CTACATCGCC
TACGGACGCT TCAACCAGGC CGCCGAACTG CTGCAGAACG CCATTTATGA CGAGCCGCAG
CGCAGCGACC TGCGCCTCAA GCTGATGGAA GTCTATGCCG AGATGGGCGA TCGCGAAGGC
TTCGCCCGCC AGGAAAACGA ACTGCGCGAG ATCGGTGGCG CCCAGCCGCA GGTCGAGCAG
CTCAAGTCGC GCTACCCGGC GATGGTGGCG GTGGCCGCGG TTGCCGGCCT GGCCGGCGCC
AAGCTGGCGC AGGACGAACT GGACAGCTTC AGCCTCGACG ACCTGTCGCT GGACCACACC
GGTCATGCGG CCGGGCCGGA CGCGGCCGGG CAGGACCTCG ACGACGCCTT CGACCTGAGC
CTGGATGACC TCGATGGCGA TCTCGGCGGT GACGAGGTGC AGGCCGACCT CAAGTCCGAT
AGCGGTGCGC TGGACGACCT GACCCTGGAC AGCGATCTCG ACCTGGCCGC CTCGGCGCCG
GCGGAGAAGC CGGCCGATGA CCTCGATTTC GGCCTGGACT TCGCCGACCT GGCGGAGACC
CCGGTCGACG CCAAGGGCGA CGGCCTGGGT GATTTCTCCC TGGACCTCGA TGCGCCGGAA
GACAAGCTGT CGGATGACGA TTTCCTGCTC TCGCTGAATG ACGACGCGGC CGCCGCGGCG
CCCGCCGACA ACGGGTTCGG CCTCGACACC GAGGCTGCCG ACGAGCCGTC GTTGTCCCTG
CCGGACGACT TCGACCTGTC GCTGGCCGAC GAACCGGCGG AGCCGGCCGT CCCGGCGAAG
AGCGAAGACA GTTTTGCCGC CCAGTTGGAC GAGGTGAGTG CGCAGTTGGA CGAATTGGCC
AGCAATCTTG ACGAGCCGAA GAATGCGGCG CCGAGCTTCT CGGCCGAGGA TGCGGCGATC
GCCTCGACCC TGGATGGGGA ATCCGACGAC GACTTCGATT TCCTTTCCGG CGCCGATGAA
GCGGCGACCA AGCTGGATCT GGCGCGTGCC TATATCGACA TGGGCGACAG CGAGGGCGCG
CGCGATATCC TCGACGAAGT CCTGGCCGAA GGCAACGACA GCCAGCAGGC GGAAGCCCGC
GAGTTGCTGG AGCGCCTGGC CTGA
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| Protein sequence | MNREKILKPR DYTMVRLRTL VRAIAAASVL TSGMAHGLGL GEITLKSALN QPLDAEIELL
EVRDLSSGEV IPSLASPEEF SKAGVDRLYY LTDLKFTPVV KPNGKSVIRV TSSKPVQEPY
LNFLVQVLWP NGRLLREYTV LLDPPLYSPQ AAASAPQAPV SAPRASNAPR APQAQAPAPV
RTTAPAGSET YRTVSNDTLW EIAQRNRTDR VSVPQAMLAF QELNPGAFVD GNINRLKSGQ
VLRIPTEQQM LERSPREALS QVQAQNQSWR GSRNPAAASA GARQLDATQR SAAGSAPAKV
DAPDNLRLVS GEGKASKGAD KGGKGDSKAI ADTLAVTKES LDSTRRENEE LQSRMQDLQS
QLDKLQKLIQ LKDAQLAKLQ GQLAAEGQGV AQPGAAQVDA GAAAQAPAAA APSPAPAGEA
PAAPAQPPVA PPPAPAAETP PAPAAPAPVQ TEEPAEASFL DELLANPLWL AVIGGSALLA
LLVLLMILSR RNAQKEKDEA AALAAEAGEE QEDALDLGKD GFDDLTLDEP EPQVAAVAAS
AEKTTAQTSD ALGEADIYIA YGRFNQAAEL LQNAIYDEPQ RSDLRLKLME VYAEMGDREG
FARQENELRE IGGAQPQVEQ LKSRYPAMVA VAAVAGLAGA KLAQDELDSF SLDDLSLDHT
GHAAGPDAAG QDLDDAFDLS LDDLDGDLGG DEVQADLKSD SGALDDLTLD SDLDLAASAP
AEKPADDLDF GLDFADLAET PVDAKGDGLG DFSLDLDAPE DKLSDDDFLL SLNDDAAAAA
PADNGFGLDT EAADEPSLSL PDDFDLSLAD EPAEPAVPAK SEDSFAAQLD EVSAQLDELA
SNLDEPKNAA PSFSAEDAAI ASTLDGESDD DFDFLSGADE AATKLDLARA YIDMGDSEGA
RDILDEVLAE GNDSQQAEAR ELLERLA
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