Gene PSPA7_1990 details

Gene Information

• Locus tag: PSPA7_1990
• Symbol: uvrB
• ID: 5355807
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 2030742
• End bp: 2032754
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640811043
• Product: excinuclease ABC subunit B
• Protein accession: YP_001347370
• Protein GI: 152985171
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0556] Helicase subunit of the DNA excision repair complex
• TIGRFAM ID: [TIGR00631] excinuclease ABC, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.762653
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATACGT TCCAACTCGA CTCGCGCTTC AAGCCCGCCG GCGACCAGCC GGAGGCCATC 
CGGCAGATGG TCGAGGGGTT GGAGGCGGGG CTTTCGCACC AGACCCTGCT CGGAGTGACG 
GGGTCGGGCA AGACCTTCAG CATCGCCAAC GTGATCGCCC AGGTGCAGCG CCCGACCCTG 
GTCCTGGCGC CGAACAAGAC TCTGGCGGCC CAGCTCTACG GGGAGTTCAA GACGTTCTTT 
CCGCATAATT CGGTGGAGTA CTTCGTTTCC TACTACGACT ACTACCAGCC GGAGGCCTAC 
GTACCATCCT CCGATACCTA TATCGAGAAG GACTCGTCGA TCAACGACCA CATCGAGCAG 
ATGCGCCTGT CGGCGACCAA GGCGCTGCTC GAGCGGCCGG ATGCGATCAT CGTCGCCACC 
GTGTCGTCCA TCTACGGCCT CGGCGACCCC GCCTCGTACC TGAAGATGGT CCTGCACCTG 
GACCGCGGCG ACCGCATCGA CCAGCGTGAG CTGCTACGGC GCCTGACCAG CCTGCAGTAC 
ACCCGCAACG ACATGGACTT CGCCCGCGCG ACCTTCCGTG TGCGTGGCGA CGTGATCGAC 
ATCTTCCCGG CCGAATCCGA TCTCGAGGCG ATCCGTGTCG AGCTGTTCGA CGACGAGGTG 
GAAAGTCTCT CGGCCTTCGA CCCGCTCACC GGCGAGGTGA TCCGCAAGCT GCCGCGCTTC 
ACCTTCTACC CCAAGAGCCA CTACGTGACT CCGCGCGAGA CGCTGCTGGA GGCGGTCGAC 
CAGATCAAGG CCGAACTCAA GGAACGCCTG GACTACCTGC GCAACAACAA CAAGCTGGTG 
GAAGCGCAGC GCCTGGAGCA GCGCACGCGT TTCGACCTGG AGATGATCCT CGAACTGGGC 
TACTGCAACG GCATCGAGAA CTACTCGCGC TACCTTTCCG GGCGCGCCCC CGGCGAGCCG 
CCGCCAACGC TCTATGACTA CCTGCCGGCC AACTCGCTGC TGGTCATCGA CGAATCGCAC 
GTCAGCGTTC CGCAGGTCGG CGCGATGTTC AAGGGCGACC GCTCGCGCAA GGAAACCCTG 
GTGGAATACG GTTTCCGTCT GCCTTCGGCT TTGGACAACC GGCCGCTGCG CTTCGAAGAG 
TGGGAGGCGG TGAGTCCGCA GACCATCTTC GTTTCCGCGA CCCCCGGGCC CTACGAGGCG 
GAGCACGCCG GGCGGGTCAT CGAACAGGTG GTACGACCCA CCGGCCTGGT CGATCCGGAG 
ATCGAGGTGC GCCCGGCGAT GACCCAGGTC GACGACCTGC TGTCGCAGAT CCGCCAGCGC 
GTGGCCAAGG ACGAGCGGGT GCTGGTGACC ACCCTGACCA AGCGCATGGC CGAAGACCTC 
ACCGATTATC TCGGCGATCA CGACGTGCGG GTCCGCTACC TGCACTCGGA CATCGATACC 
GTCGAGCGGG TGGAGATCAT CCGCGACCTG CGCTCCGGCG CTTTCGACGT GCTGGTGGGA 
ATCAACCTCC TGCGCGAGGG CCTGGACATG CCGGAGGTAT CGCTGGTGGC GATCCTCGAC 
GCGGACAAGG AAGGTTTCCT GCGCTCGGAG CGCTCGCTGA TCCAGACCAT CGGTCGTGCC 
GCGCGCAACC TGCACGGCAA GGCGATTCTT TACGCCGACA ACGTCACCGG CTCGATGCAG 
CGCGCGATCG ACGAGACCGA GCGGCGGCGG GCCAAGCAGA TCGCCTTCAA CGAAGCCCAC 
GGCATCGTGC CCAAGGGCGT GCGCAAGGAC ATCAAGGACA TCCTCGAGGG CGCGGTGGTG 
CCCGGCGCGC GCGGCAAGCG CAAGGGCGTG GCCAAGGTCG CGGAGGAGAG CGGGCGCTAC 
GACAACGAAC TGCGTTCGCC GAGCGAGATC AGCAAGCGCA TCCGCCAGCT GGAGGAAAAG 
ATGTACCAGT TGGCTCGCGA CCTGGAGTTC GAAGCCGCGG CGCAACTGCG CGACGAGATC 
CAGACGCTGC GCGAGCGCCT GGTCAACGTC TGA 

 

Protein sequence

MDTFQLDSRF KPAGDQPEAI RQMVEGLEAG LSHQTLLGVT GSGKTFSIAN VIAQVQRPTL 
VLAPNKTLAA QLYGEFKTFF PHNSVEYFVS YYDYYQPEAY VPSSDTYIEK DSSINDHIEQ 
MRLSATKALL ERPDAIIVAT VSSIYGLGDP ASYLKMVLHL DRGDRIDQRE LLRRLTSLQY 
TRNDMDFARA TFRVRGDVID IFPAESDLEA IRVELFDDEV ESLSAFDPLT GEVIRKLPRF 
TFYPKSHYVT PRETLLEAVD QIKAELKERL DYLRNNNKLV EAQRLEQRTR FDLEMILELG 
YCNGIENYSR YLSGRAPGEP PPTLYDYLPA NSLLVIDESH VSVPQVGAMF KGDRSRKETL 
VEYGFRLPSA LDNRPLRFEE WEAVSPQTIF VSATPGPYEA EHAGRVIEQV VRPTGLVDPE 
IEVRPAMTQV DDLLSQIRQR VAKDERVLVT TLTKRMAEDL TDYLGDHDVR VRYLHSDIDT 
VERVEIIRDL RSGAFDVLVG INLLREGLDM PEVSLVAILD ADKEGFLRSE RSLIQTIGRA 
ARNLHGKAIL YADNVTGSMQ RAIDETERRR AKQIAFNEAH GIVPKGVRKD IKDILEGAVV 
PGARGKRKGV AKVAEESGRY DNELRSPSEI SKRIRQLEEK MYQLARDLEF EAAAQLRDEI 
QTLRERLVNV