Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1868 |
Symbol | prc |
ID | 5358577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1906064 |
End bp | 1908163 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640810921 |
Product | periplasmic tail-specific protease |
Protein accession | YP_001347249 |
Protein GI | 152989644 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.435516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGTT TTCTGCCCCG TACCGCCCTG TTGCTCCTCC TCGGCGCCAG TTCGCTGCCG CTGTTCGCCT CGACCGCCGT CTCCGTCGGC AGCGGCCCCC AGAACCCCTG GGACAGCCTG CAGCCGGACC GCGAGCAGGT CATCGCCAGC CTCAACGTGG TGGAACTGCT CAAGCGTCAT CACTACAACA AGCCGCCACT GAACGACGAG CGCTCGGCCA AGATCTACGA CAGCTACCTG AAGATGCTCG ACCCGGCGCG GATGTACTTC ACCGCCGGCG ACATCGCCGA GTTCGATCGC TGGCGCAACA GGTTCGACGA CTTCCTCAAG AGCGGCGACC TGGATCCCGG CTTCGTCATC TACAAGCGCC ACCTCGACCG CCTGAGGGGC CGCCTCGACT ATGCCCTGGC GATGCTCGAC AAGGGCGTCG ACAAGATCGA CTTCAGCGTC GACGAGAGCC TGCTGATCGA CCGCGAGAAG GCTCCCTGGG CTAAGGACAC CGCAGAGCTC GACGACCTCT GGCGCAAGAA GGTCAAGGAC GAGGTCCTGC GCCTGAAGAT CACCGGCAAG GACGACAAGG CGATCCAGGA ACAGCTCACC AAGCGCTACA AGAACCAGCT GTCGCGCCTG AAGCAGACCC GCAGCGAAGA TATCTTCCAG GCCTACATCA ACGCCTTCGC CCAGTCCTAC GACCCGCATA CCCAGTACCT GTCGCCGGAT AACGCGGAAA ACTTCGACAT CAACATGAGC CTCTCGCTGG AAGGCATCGG CGCGGTGTTG CAGAGCGACA ACGACTACGT CAAGGTCGTG CGCCTGGTAC CGGCCGGCCC GGCGGCGAAG AGCAAGCAGA TCGCCACCTC CGACAAGATC ATCGGCGTCG CCCAGGGCAA GGGCGAGATG GTCGACGTGG TCGGCTGGCG CCTGGACGAA GTGGTCAAAC TGATCCGTGG GCCGAAAGGT TCGCAGGTGC GCCTGGAAGT GATCCCGGCG AGCAACGCGC CGAACGACCA GACCAGCAAG ATCGTCGCCA TCACCCGCGA GGCGGTGAAG CTGGAAGACC AGGCGGCGAA GAAATCCATC ATCAATGTCG ACCACGAGGG CCGCAGCTAC AAGCTCGGCG TGATCGACCT GCCGGCCTTC TACCTGGACT TCAAGGCCTA CCGCGCCGGC GACCCGAACT ACAAGAGCAC CACCCGCGAC GTCAAGAAGC TGGTCGCCGA ACTGCAGAAG GACAAGGTCG ACGGCATCGT CCTCGACCTG CGCAACAATG GTGGCGGCTC CCTGCAGGAA GCCACCGAGC TGACCGGCCT GTTCATCGAC CAGGGCCCGA CCGTCCTGGT GCGCAACAGC GACGGTCGCG TCGACGTGCT CAACGACGAC GAAGGCAAGG CCTTCTACAC CGGCCCGCTG GCGGTGCTGG TCAACCGTCT TTCGGCCTCC GCCTCGGAGA TCTTCGCCGG CGCCATGCAG GACTACCACC GCGCGCTGAT CCTCGGTGGA CAGACCTTCG GCAAGGGCAC CGTGCAGACC ATCCAGCCGC TCAACCACGG CGAACTGAAG CTGACCCTGG CGAAGTTCTA CCGTGTCTCC GGGCAGAGCA CCCAGCACCA GGGCGTGATC CCGGACATCA GCTACCCGTC CATCGTCGAC GACAAGGAAA TCGGCGAAAG CGCCCTGCCC GACTCGATGC CGTGGGACAC CATCCGCCCG GTGGTGAAGG ACGAGGCCAA TCCGTTCAAG CCGTTCCTCG CGCAACTCAA GGCCCAGCAC GACGCGCGCA CCGAGAACAA CGCCGACTTC GTCTATGCCC GCAAGCGCCT GGCCCTGGCC CAGGAGCTGA TGAAGGAGAA GACCGTCAGC CTGAACGAGG CCAAGCGTCG CGCCCAGCAG ACCAGCATCG AGAACCGCCA GTTGGCCATG GAGAACGCCC TGCGCAAGTC CAAGGGCCAG GAACCGCTGA AGGAACTCAA GCGCGAGGAC GAGAACGCCC TGCCAGAAGA GGACGACAAG ACCAAGCCGC AGGACGACGC CTACCTCACC GAGTCCGGGC ACATCCTGCT GGACTACCTG AACCTCAACT CGGCGGTGGC CAAGCACTGA
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Protein sequence | MKRFLPRTAL LLLLGASSLP LFASTAVSVG SGPQNPWDSL QPDREQVIAS LNVVELLKRH HYNKPPLNDE RSAKIYDSYL KMLDPARMYF TAGDIAEFDR WRNRFDDFLK SGDLDPGFVI YKRHLDRLRG RLDYALAMLD KGVDKIDFSV DESLLIDREK APWAKDTAEL DDLWRKKVKD EVLRLKITGK DDKAIQEQLT KRYKNQLSRL KQTRSEDIFQ AYINAFAQSY DPHTQYLSPD NAENFDINMS LSLEGIGAVL QSDNDYVKVV RLVPAGPAAK SKQIATSDKI IGVAQGKGEM VDVVGWRLDE VVKLIRGPKG SQVRLEVIPA SNAPNDQTSK IVAITREAVK LEDQAAKKSI INVDHEGRSY KLGVIDLPAF YLDFKAYRAG DPNYKSTTRD VKKLVAELQK DKVDGIVLDL RNNGGGSLQE ATELTGLFID QGPTVLVRNS DGRVDVLNDD EGKAFYTGPL AVLVNRLSAS ASEIFAGAMQ DYHRALILGG QTFGKGTVQT IQPLNHGELK LTLAKFYRVS GQSTQHQGVI PDISYPSIVD DKEIGESALP DSMPWDTIRP VVKDEANPFK PFLAQLKAQH DARTENNADF VYARKRLALA QELMKEKTVS LNEAKRRAQQ TSIENRQLAM ENALRKSKGQ EPLKELKRED ENALPEEDDK TKPQDDAYLT ESGHILLDYL NLNSAVAKH
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