Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1867 |
Symbol | |
ID | 5354763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1904221 |
End bp | 1905969 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640810920 |
Product | hypothetical protein |
Protein accession | YP_001347248 |
Protein GI | 152984510 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.145916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTCA CCGAGCAGTT GAGCGCCCTG GACAGCATCC TGGCCCATGG CGACCTGCAC TGCCTGTTCC AGCCCATCCT CTCGCTTTCC GAGCGGCGCC TGGTCGGCTA CGAAGCGCTG ACCCGCGGCC CATCCAACAG CCCCTTGCAT TCGCCCCTGG CGTTGTTCGC CGTCGCGCGC CAGTGCGGGC GGCTGAGCGA ACTGGAACTG CTTTGCCGGC AATGCGCTTT CAGGCGCTTC CGCGACATCC AGGGCGACGC CATGCTGTTC CTCAACGTCT CGCCGGAATC CCTCCTCGAG GCCGGCCATC CGCCCGGCCG CACCCTGCAA TTGCTGCAAC AGTTGGGGAT CTCGCCGAAC CGGGTGGTGA TCGAGCTGAC CGAGCAGACT CCCATCGACG ACTTCGACCT GCTCGACACC GCACTGCACC ACTATCGCGC CATGGGCTTC TCCATCGCCC TCGACGACCT CGGTGCTGGC TACTCCAGCC TGCGTCTGTG GTCCGAATTG CGTCCCGACT ACGTGAAGAT CGACCGCCAC TTCGTCGACG GCATCCACCT GGATCCCGTG AAGCGCGAGT TCGTCGGCTC CATCCTGAAG ATGGCGCGGG CCTCCCGCGC CCAGGTGATT GCCGAGGGCA TCGAGCTGGC GGAGGAACTG GCGGTGCTCA GCGAGATGGG TGTCGATCTG GTACAGGGCT ATCTGTTCGG CCGACCGCAG GAGCATCCGG CGACCGATGT GCAGCAAATG CTGCCCGGCG CCACCGGCTC CCCCCCAGTT CCAGGCGACC AGCCCGGCGA TCTGCGCACG CTGCTGCTGC AACAGCGTGC GGTCGACACG CGCACGTCGA CCCAGGACGT GGTGGAAATC TTCCGCCGCC AGGTCAATCT GAATTCCCTG GCGATTGTCG ACGAAGAACT TCGACCGTCC GGAATCGTCC ACCGCCACGC GCTCACCGAC GCCTTGCTCC GGCCCTTCGC CTGCGACCTG TTCCTGCGCA AGCCGATCAG CCGCCTGATG AGCGACGATT TTCTCGCCGT GGAACTCGGT CAGACCCTGC AGCAGGTCAG CCGCTTGCTG ACCAGCCGCG CACGCCAGCG TATCGAGGAA GACTTCATCA TCACCCACGC CGGGCGCTAT GCGGGGATGG GCCGGGTGAT CGACGTGCTC AGGCTGATCA CCGAGGAAAA GATCCAGCAG GCCCGGCACG CCAATCCGCT CACCCTGCTG CCCGGCAACG TACCGATCCA GCAATGCCTC GAACGCCTGC TGCAGCAAAG GCGCGAAGCG GTTATCTGCT ACGTCGACAT CGACAGTTTC AAGCCCTTCA ACGATCTCTA CGGCTACGCC CGCGGCGACG AGGTCCTGCT GTGCCTGGCG CAGTGCCTGA GCGAACGGAT CGATCCAGGC TGCGAGTTCG TCGGTCACAT CGGCGGCGAC GACTTCATGC TGGTGCTCGG TCCCGAGGAC TGGCGCAGGC GGATCAACCG GCTGCTGGAA ACCTTCCAGG GCCAATGCCG GCGCTTCTAC AGCCGCGAAC ACCTGGAAGC CGGTTGTTTC GTCGCGCACA ACCGCCAGGG CCAGCGCGAG GAGTACCCGC TGCTGTCATT GTCCGTCGGC GTGGTGCATC TGCCGGCCGA GGCCTGCCAG GGCATGGATG CCGCGCACCT GGCGACGCTG GCCTCCGAGG CCAAGCACCA GGCCAAGGCG GTGCCAGGCT ACAGCCTGCA CCTGATCGAG GCCGCCTGA
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Protein sequence | MTVTEQLSAL DSILAHGDLH CLFQPILSLS ERRLVGYEAL TRGPSNSPLH SPLALFAVAR QCGRLSELEL LCRQCAFRRF RDIQGDAMLF LNVSPESLLE AGHPPGRTLQ LLQQLGISPN RVVIELTEQT PIDDFDLLDT ALHHYRAMGF SIALDDLGAG YSSLRLWSEL RPDYVKIDRH FVDGIHLDPV KREFVGSILK MARASRAQVI AEGIELAEEL AVLSEMGVDL VQGYLFGRPQ EHPATDVQQM LPGATGSPPV PGDQPGDLRT LLLQQRAVDT RTSTQDVVEI FRRQVNLNSL AIVDEELRPS GIVHRHALTD ALLRPFACDL FLRKPISRLM SDDFLAVELG QTLQQVSRLL TSRARQRIEE DFIITHAGRY AGMGRVIDVL RLITEEKIQQ ARHANPLTLL PGNVPIQQCL ERLLQQRREA VICYVDIDSF KPFNDLYGYA RGDEVLLCLA QCLSERIDPG CEFVGHIGGD DFMLVLGPED WRRRINRLLE TFQGQCRRFY SREHLEAGCF VAHNRQGQRE EYPLLSLSVG VVHLPAEACQ GMDAAHLATL ASEAKHQAKA VPGYSLHLIE AA
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