Gene PSPA7_1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_1867 
Symbol 
ID5354763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp1904221 
End bp1905969 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content66% 
IMG OID640810920 
Producthypothetical protein 
Protein accessionYP_001347248 
Protein GI152984510 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.145916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCA CCGAGCAGTT GAGCGCCCTG GACAGCATCC TGGCCCATGG CGACCTGCAC 
TGCCTGTTCC AGCCCATCCT CTCGCTTTCC GAGCGGCGCC TGGTCGGCTA CGAAGCGCTG
ACCCGCGGCC CATCCAACAG CCCCTTGCAT TCGCCCCTGG CGTTGTTCGC CGTCGCGCGC
CAGTGCGGGC GGCTGAGCGA ACTGGAACTG CTTTGCCGGC AATGCGCTTT CAGGCGCTTC
CGCGACATCC AGGGCGACGC CATGCTGTTC CTCAACGTCT CGCCGGAATC CCTCCTCGAG
GCCGGCCATC CGCCCGGCCG CACCCTGCAA TTGCTGCAAC AGTTGGGGAT CTCGCCGAAC
CGGGTGGTGA TCGAGCTGAC CGAGCAGACT CCCATCGACG ACTTCGACCT GCTCGACACC
GCACTGCACC ACTATCGCGC CATGGGCTTC TCCATCGCCC TCGACGACCT CGGTGCTGGC
TACTCCAGCC TGCGTCTGTG GTCCGAATTG CGTCCCGACT ACGTGAAGAT CGACCGCCAC
TTCGTCGACG GCATCCACCT GGATCCCGTG AAGCGCGAGT TCGTCGGCTC CATCCTGAAG
ATGGCGCGGG CCTCCCGCGC CCAGGTGATT GCCGAGGGCA TCGAGCTGGC GGAGGAACTG
GCGGTGCTCA GCGAGATGGG TGTCGATCTG GTACAGGGCT ATCTGTTCGG CCGACCGCAG
GAGCATCCGG CGACCGATGT GCAGCAAATG CTGCCCGGCG CCACCGGCTC CCCCCCAGTT
CCAGGCGACC AGCCCGGCGA TCTGCGCACG CTGCTGCTGC AACAGCGTGC GGTCGACACG
CGCACGTCGA CCCAGGACGT GGTGGAAATC TTCCGCCGCC AGGTCAATCT GAATTCCCTG
GCGATTGTCG ACGAAGAACT TCGACCGTCC GGAATCGTCC ACCGCCACGC GCTCACCGAC
GCCTTGCTCC GGCCCTTCGC CTGCGACCTG TTCCTGCGCA AGCCGATCAG CCGCCTGATG
AGCGACGATT TTCTCGCCGT GGAACTCGGT CAGACCCTGC AGCAGGTCAG CCGCTTGCTG
ACCAGCCGCG CACGCCAGCG TATCGAGGAA GACTTCATCA TCACCCACGC CGGGCGCTAT
GCGGGGATGG GCCGGGTGAT CGACGTGCTC AGGCTGATCA CCGAGGAAAA GATCCAGCAG
GCCCGGCACG CCAATCCGCT CACCCTGCTG CCCGGCAACG TACCGATCCA GCAATGCCTC
GAACGCCTGC TGCAGCAAAG GCGCGAAGCG GTTATCTGCT ACGTCGACAT CGACAGTTTC
AAGCCCTTCA ACGATCTCTA CGGCTACGCC CGCGGCGACG AGGTCCTGCT GTGCCTGGCG
CAGTGCCTGA GCGAACGGAT CGATCCAGGC TGCGAGTTCG TCGGTCACAT CGGCGGCGAC
GACTTCATGC TGGTGCTCGG TCCCGAGGAC TGGCGCAGGC GGATCAACCG GCTGCTGGAA
ACCTTCCAGG GCCAATGCCG GCGCTTCTAC AGCCGCGAAC ACCTGGAAGC CGGTTGTTTC
GTCGCGCACA ACCGCCAGGG CCAGCGCGAG GAGTACCCGC TGCTGTCATT GTCCGTCGGC
GTGGTGCATC TGCCGGCCGA GGCCTGCCAG GGCATGGATG CCGCGCACCT GGCGACGCTG
GCCTCCGAGG CCAAGCACCA GGCCAAGGCG GTGCCAGGCT ACAGCCTGCA CCTGATCGAG
GCCGCCTGA
 
Protein sequence
MTVTEQLSAL DSILAHGDLH CLFQPILSLS ERRLVGYEAL TRGPSNSPLH SPLALFAVAR 
QCGRLSELEL LCRQCAFRRF RDIQGDAMLF LNVSPESLLE AGHPPGRTLQ LLQQLGISPN
RVVIELTEQT PIDDFDLLDT ALHHYRAMGF SIALDDLGAG YSSLRLWSEL RPDYVKIDRH
FVDGIHLDPV KREFVGSILK MARASRAQVI AEGIELAEEL AVLSEMGVDL VQGYLFGRPQ
EHPATDVQQM LPGATGSPPV PGDQPGDLRT LLLQQRAVDT RTSTQDVVEI FRRQVNLNSL
AIVDEELRPS GIVHRHALTD ALLRPFACDL FLRKPISRLM SDDFLAVELG QTLQQVSRLL
TSRARQRIEE DFIITHAGRY AGMGRVIDVL RLITEEKIQQ ARHANPLTLL PGNVPIQQCL
ERLLQQRREA VICYVDIDSF KPFNDLYGYA RGDEVLLCLA QCLSERIDPG CEFVGHIGGD
DFMLVLGPED WRRRINRLLE TFQGQCRRFY SREHLEAGCF VAHNRQGQRE EYPLLSLSVG
VVHLPAEACQ GMDAAHLATL ASEAKHQAKA VPGYSLHLIE AA