| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1728 |
|---|
| Symbol | |
|---|
| ID | 5359047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1767612 |
|---|
| End bp | 1768583 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640810781 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001347112 |
|---|
| Protein GI | 152986746 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0534587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAT GGAAACTCTT TACCCCGCTG CTGATCCTCG CGATCGTCGC CATCACCCTT
TACCTGCGGC TGCACAACCC GCCCCTGCTG CTGCAGGGCG AGGCGGACGC CACCAACGTC
ATCGTGTCCT CCAAGGCCAA GGGCCGTGTG CAGGTCCTGC ATGTGCGGCG TGGTGACGAC
GTGAAGCGCG GCGACCTGCT GGTCAGTCTC GACAGCCCCG AGCTGGAAGC CCAGCTCGAT
GCCCTGCACG CGGCGCGCAA CCAGGCCCAG GCGCAGCTCG ACGAGTCGCT CCACGGCACC
CGCGAAGAGA GCATCCGCGC GCTCAGGGCC AGCCTGGCCC AGGCCGAGGC CGAGCTGCGC
AACGCCGAGG CGGACTTCCA GCGCAACCAG CAGATGGTCG AGCGCGGCTT TCTCTCGCGC
ACCCAGTTCG ACCTGGCGCG CCGCGAGCGC GACGTCGCCC GCGATCGCGT CGCCGAGGCC
CGGGCCAACC TCGACGAAGG CCTCAAGGGC GATCGCGAGG AGCGCCGCCA GGCGTTGCAG
GCCGCGGTGC GCCGGGCCGA CGCGCAGATC GCCGAGCTGC AGGCGCAGAC CGATGACCTG
CAGGTGCGCG CGCCGGTGGA CGGCGAGGTC GGGCCGATCC CCGCCGAGCA GGGCGAGCTG
ATCAACGCCT ACAGTCCACT GCTGACCCTG GTGCGGCTGG ACGACAGCTA CTTCGTCTTC
AACCTGCGCG AGGACATCCT GGCCAAGGTC CGCAAGGGCG ACCACATCGT CATGCAGGTG
CCCGGCCTGG GTGGCGCAGA GGTCGAGACC GAACTGCGCT ACATCGCTCC GCTGGGCGAT
TTCTCGACCA GGCGCGCGAC CCGCGCCACC GGCGACTTCG ACCTGAAGAC CTTCGAGACC
CGCTTCTATC CGCTGCGGCC CACCCCCGGC CTGCGCCCGG GCATGAGCGC GCTGTGGCGC
TGGACCCATT GA
|
|---|
| Protein sequence | MKGWKLFTPL LILAIVAITL YLRLHNPPLL LQGEADATNV IVSSKAKGRV QVLHVRRGDD
VKRGDLLVSL DSPELEAQLD ALHAARNQAQ AQLDESLHGT REESIRALRA SLAQAEAELR
NAEADFQRNQ QMVERGFLSR TQFDLARRER DVARDRVAEA RANLDEGLKG DREERRQALQ
AAVRRADAQI AELQAQTDDL QVRAPVDGEV GPIPAEQGEL INAYSPLLTL VRLDDSYFVF
NLREDILAKV RKGDHIVMQV PGLGGAEVET ELRYIAPLGD FSTRRATRAT GDFDLKTFET
RFYPLRPTPG LRPGMSALWR WTH
|
|---|
| |