| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1693 |
|---|
| Symbol | |
|---|
| ID | 5354269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1734009 |
|---|
| End bp | 1734911 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640810746 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001347077 |
|---|
| Protein GI | 152985568 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCC GTCAACTCCG CAGCTTCGTC GAAGTGGTCC GCCAGGGCAG CTTCACCCAG
GCTGCGCAGG TCCGCCACGC CAGCCAGTCG ACCATCAGCA AGCAGGTCGC CCAGCTGGAG
CAGAGCCTCG GCGTGCAGGT ACTGGAGCGC AACGGCCCGC ACGTGCGCCT GACCGACGCC
GGCGCCGTGG TGTTTCGCCG CGCCGAGGAG ATGCTGCGGC TGCGCCGCGA CCTGCTCAGC
GAACTGGACG ACCTCAGCCA ACTCAACCGC GGCGAACTGC GCCTGGGCCT GCCGTTGCTC
GGTGCCGACG CGCTGTTCGC CCAACGCTTC GCCGAATACC GGCGGCGCTA TCCGAACATC
GCCGTGCACC TGGTGGAAGG CGGCAGCAAG ACCATGGAGC AGGCGGTGCT GGCCGGCGAG
CTGGAACTGG CCGGCAGCCT CACCCCGGCG GACGACGGCT TCGACTACCA GCCGTTCTGC
AACGAACCGC TGGACGTGCT GCTGCCGGCC GGGCATCCCA AGGCCTCGGC CGCCAGCGTA
GCCCTCGGCG AACTGGCGGA CAGCCCGTTC CTGCTCTACC AGCAGAGCTT CACCCTCAAC
GACCGCCTGC TGCGCGCCTG CCTGGAGGCA GGGTTCAGCC CGCGCGAGGG CGGCCGCAGC
GGCCAGGCCG ACTTCCTCGG CGCGCTGGTG GCGGCCAACC AGGGGGTGGT CCTGCTGCCA
CGGGTGATCG CGCGCGAGAT CGAACGCCCG GGAGTGGTGC GGGTCCTGCT CAGGGAGCCG
GACCTGCGCT GGGACATCGC CTTCATCTGG CGCCGTGGTG GCTACCTGTC GCGGGCGGCG
CAGGCCTGGC TGGAGCTGCT GCGCGAGCGG CCGCTGGAAC AAAGCCCGGC GCAGGACGGA
TAA
|
|---|
| Protein sequence | MEFRQLRSFV EVVRQGSFTQ AAQVRHASQS TISKQVAQLE QSLGVQVLER NGPHVRLTDA
GAVVFRRAEE MLRLRRDLLS ELDDLSQLNR GELRLGLPLL GADALFAQRF AEYRRRYPNI
AVHLVEGGSK TMEQAVLAGE LELAGSLTPA DDGFDYQPFC NEPLDVLLPA GHPKASAASV
ALGELADSPF LLYQQSFTLN DRLLRACLEA GFSPREGGRS GQADFLGALV AANQGVVLLP
RVIAREIERP GVVRVLLREP DLRWDIAFIW RRGGYLSRAA QAWLELLRER PLEQSPAQDG
|
|---|
| |