Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1660 |
Symbol | |
ID | 5358657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1698068 |
End bp | 1699435 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640810713 |
Product | MFS family transporter |
Protein accession | YP_001347044 |
Protein GI | 152987282 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCACCG CGCCGCCCTC CGCCGCCGAA CGTCTGGAAC GACTGCCGCT GAGCCCCTAC CACCGGCTGA TCTTCGTGAT CATCGCCCTG GCGTTCTTCT TCGACTCGAT GGACCTGGCG ATGATGACCT TCCTGCTCGG CTCGATCAAA GCCGAGTTCG GCCTCGACTC GGCCCAGGCC GGCCTGCTGG CCAGCTCCAG CTTCTTCGGC ATGGTGATCG GCGCGGCGCT GTCGGGCATG CTCGCCGACC GCTTCGGGCG CAAGCCGGTG TTCCAGTGGA GCATCGTGCT CTGGGGCCTG GCCAGCTACC TCTGCTCCAC CGCCGGCGAC CTCGGCAGCC TGACCCTCTA CCGGGTGCTG CTGGGGATCG GCATGGGCAT GGAGTTCCCC ATCGCCCAGT CGCTGCTCTC GGAAATGATC CCGGCCAGCC GCCGCGGCAA GTACATCGCC CTGATGGACG GCTTCTGGCC GCTGGGCTTC GTCGCCGCCG GCTGCCTGTC CTACATCCTC CTGCCGCTGA CCGGCTGGCG CGCGATCTTT CTGGTGCTGG CGCTGCCGGC GGTCTTCGTC CTGGTCATCC GCTTCCTGGT GCCCGAGTCG CCACGCTGGC TGGAGCAGGC CGGCCGGCGC GAACAGGCCG AGCGCGTGCT GCGCGGCATC GAGGCACGGG TGATGCGTTC GCTGCGCCTC GCCGAGCTGC CGCCGCCGCA GCGCCTGGCG CAGCCGGAAC CTTCGCGGCC GGGCTTCTTC GGCGCCTTCG CCGAACTCTG GTCGCCGACC TACCGGCGCC GCACGCTGAC CGTCTGGGGC CTGTGGTTCT TCGCCCTGCT CGGCTTCTAC GGCCTGACCT CCTGGCTCAG CGCGCTGCTC CAGCAATCCG GCTTCGCCGT CACCCAGTCG GTGTATTACA CCGTGCTGAT CTCGCTGGCC GGGATACCCG GCTTCCTCTG CGCGGCCTGG CTGGTGGAAA GCTGGGGGCG CAAGCCGAGC TGCGTGCTGA TGCTCCTCGG CGGCGGCGCG ATGGCCTACG CCTACGGCCA GACCGCGGTG TTCGGCGGCA GCCTGGCGCT GCTGGTCGGC TTCGGCCTGG CCATGCAGTT CTTCCTGTTC GGCATGTGGG CGGTGCTCTA CACCTATACC CCGGAGCTCT ATCCGACCTC CGCGCGGGCC ACCGGCTCGG GCTTCGCCTC GGCGGTCGGG CGGATCGGCT CGCTGCTCGG CCCGCTGGTC ACCGGGCTGA TCCTGCCGCT CACCGGCCAG GGCGGGGTGT TCACCCTCGG CGCGCTGTGT TTCGGCCTCG CCGCCCTGGT GGTCTGGGGC TTCGGCATCG AGACCCGCGG GCGCACCCTG GAGGAGCTCG CCGGCTGA
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Protein sequence | MPTAPPSAAE RLERLPLSPY HRLIFVIIAL AFFFDSMDLA MMTFLLGSIK AEFGLDSAQA GLLASSSFFG MVIGAALSGM LADRFGRKPV FQWSIVLWGL ASYLCSTAGD LGSLTLYRVL LGIGMGMEFP IAQSLLSEMI PASRRGKYIA LMDGFWPLGF VAAGCLSYIL LPLTGWRAIF LVLALPAVFV LVIRFLVPES PRWLEQAGRR EQAERVLRGI EARVMRSLRL AELPPPQRLA QPEPSRPGFF GAFAELWSPT YRRRTLTVWG LWFFALLGFY GLTSWLSALL QQSGFAVTQS VYYTVLISLA GIPGFLCAAW LVESWGRKPS CVLMLLGGGA MAYAYGQTAV FGGSLALLVG FGLAMQFFLF GMWAVLYTYT PELYPTSARA TGSGFASAVG RIGSLLGPLV TGLILPLTGQ GGVFTLGALC FGLAALVVWG FGIETRGRTL EELAG
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