Gene PSPA7_1650 details

Gene Information

• Locus tag: PSPA7_1650
• Symbol: rhlL
• ID: 5355064
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 1689105
• End bp: 1689713
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640810703
• Product: autoinducer synthesis protein RhlI
• Protein accession: YP_001347034
• Protein GI: 152983670
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism; [T] Signal transduction mechanisms
• COG ID: [COG3916] N-acyl-L-homoserine lactone synthetase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGAAT TGCTCTCGGA ATCGCTGGAA GGGCTTTCCG CCAGCATGAT CGCCGAGCTG 
GGACGCTACC GGCACGAGGT CTTCATCGAG AAGCTGGGTT GGGACGTGGA GTCCACCTCC 
AGGACCCGCG GCCAGGAGTT CGACCAGTTC GACCATCCGC AAACCCGCTA CATCATCGCC 
AGGAGCCCGC GCGAAGGCAT CTGCGGCTGC GCCCGCCTGC TGCCGACCAC CGAGGCCTAC 
CTGCTCAAGG ACGTCTTCGC CTACCTGTGC AGCGAGACCC CGCCGAGCGA TCCGTCGGTC 
TGGGAGCTCT CGCGCTACGC CGCCGGCGCC GCGGACGACC CGCAACTGGC GATGAAGGTG 
TTCTGGTCCA GCCTGCAATG CGCCTGGTAC CTGGGCGCCA GCTCGGTGGT GGCGGTGACC 
ACCACGGCCA TGGAGCGCTA TTTCATCCGC AACGGGGTGG TCCTCGAGCG CCTCGGTCCG 
CCGCAGAAGA GCAAGGGCGA GTCGCTGGTC GCGATCAGCT TCCCGGCCTA CCAGGAACGC 
GGCCTGGAGA TGCTGCTGCG CTACCATCCC GAGTGGCTGC GGGGCGTGCC GCTGTCGATG 
GCGGTGTGA 

 

Protein sequence

MIELLSESLE GLSASMIAEL GRYRHEVFIE KLGWDVESTS RTRGQEFDQF DHPQTRYIIA 
RSPREGICGC ARLLPTTEAY LLKDVFAYLC SETPPSDPSV WELSRYAAGA ADDPQLAMKV 
FWSSLQCAWY LGASSVVAVT TTAMERYFIR NGVVLERLGP PQKSKGESLV AISFPAYQER 
GLEMLLRYHP EWLRGVPLSM AV