Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1512 |
Symbol | ispF |
ID | 5358379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1537891 |
End bp | 1538364 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640810565 |
Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_001346896 |
Protein GI | 152985229 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAATTG GCCATGGCTA CGACGTGCAT CGCTTCGGCG AGGGCGACTA CATCACCCTC GGTGGCGTGC GCATTCCCCA CAAACACGGG CTGGTCGCCC ACTCCGACGG CGACGTGCTG TTGCACGCCT TGTCCGACGC GCTGCTGGGC GCGGCGGCGC TGGGCGACAT CGGCAAGCAT TTCCCGGACA CCGACCCGCG CTTCAAGGGC GCCGACAGTC GCGCGTTGCT GCGACATGTG GTCGCCATCG TCGCCGAGAA GGGCTGGAAG GTCGGCAACG TCGACGCCAC CATCGTCGCC CAGGCGCCGA AGATGGCGCC GCACATCGAG ACCATGCGCG GGTTGATCGC CGAGGATCTC GGTGTCGCGC TCGACCAGGT CAACGTCAAG GCCACCACTA CCGAACGGCT TGGTTTCACC GGACGCGAAG AGGGCATTGC TGTACATGCG GTCGCTTTGC TGATGGCCCG ATGA
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Protein sequence | MRIGHGYDVH RFGEGDYITL GGVRIPHKHG LVAHSDGDVL LHALSDALLG AAALGDIGKH FPDTDPRFKG ADSRALLRHV VAIVAEKGWK VGNVDATIVA QAPKMAPHIE TMRGLIAEDL GVALDQVNVK ATTTERLGFT GREEGIAVHA VALLMAR
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