Gene PSPA7_1512 details

Gene Information

• Locus tag: PSPA7_1512
• Symbol: ispF
• ID: 5358379
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 1537891
• End bp: 1538364
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640810565
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_001346896
• Protein GI: 152985229
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAATTG GCCATGGCTA CGACGTGCAT CGCTTCGGCG AGGGCGACTA CATCACCCTC 
GGTGGCGTGC GCATTCCCCA CAAACACGGG CTGGTCGCCC ACTCCGACGG CGACGTGCTG 
TTGCACGCCT TGTCCGACGC GCTGCTGGGC GCGGCGGCGC TGGGCGACAT CGGCAAGCAT 
TTCCCGGACA CCGACCCGCG CTTCAAGGGC GCCGACAGTC GCGCGTTGCT GCGACATGTG 
GTCGCCATCG TCGCCGAGAA GGGCTGGAAG GTCGGCAACG TCGACGCCAC CATCGTCGCC 
CAGGCGCCGA AGATGGCGCC GCACATCGAG ACCATGCGCG GGTTGATCGC CGAGGATCTC 
GGTGTCGCGC TCGACCAGGT CAACGTCAAG GCCACCACTA CCGAACGGCT TGGTTTCACC 
GGACGCGAAG AGGGCATTGC TGTACATGCG GTCGCTTTGC TGATGGCCCG ATGA 

 

Protein sequence

MRIGHGYDVH RFGEGDYITL GGVRIPHKHG LVAHSDGDVL LHALSDALLG AAALGDIGKH 
FPDTDPRFKG ADSRALLRHV VAIVAEKGWK VGNVDATIVA QAPKMAPHIE TMRGLIAEDL 
GVALDQVNVK ATTTERLGFT GREEGIAVHA VALLMAR