| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1506 |
|---|
| Symbol | ispD |
|---|
| ID | 5358871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1532476 |
|---|
| End bp | 1533180 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640810559 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_001346890 |
|---|
| Protein GI | 152987081 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTT CCGACCTTCC CGCCTTCTGG ACGGTGATCC CCGCCGCCGG CGTGGGTTCG
CGCATGCGCG CCGACCGCCC GAAGCAATAC CTCGATCTTG CCGGTCGCAC CGTGATCGAA
CGCACCCTCG ACTGTTTCCT CGAGCATCCT ATGCTCAGGG GGCTGGTGGT CTGTCTGGCC
GAGGACGATC CCTACTGGCC CGGGCTGGAT TGCGCCGCCA GCCGGCACGT GCAGCGAGCG
GCCGGCGGCG TCGAACGGGC CGACTCGGTG CTCAGCGGCT TGCTGCGTCT GCTGGAACTG
GGCGCCCGGG CCGACGACTG GGTGCTGGTG CACGATGCGG CCCGGCCGAA CCTGACACGC
GGCGACCTCG ACCGCCTGCT CGAAGAACTC GCCGAGGATC CGGTCGGTGG CCTGCTGGCG
GTACCGGCGC GGGACACTCT CAAGCGCTCC GACCGCGACG GCCGGGTCAG CGAAACCATC
GACCGCTCGG TGGTCTGGTT GGCCTACACG CCGCAGATGT TCCGCCTCGG CGCCCTGCAT
CGGGCGCTGG CCGATGCGCT GGTGGCCGGC GTGGCGATCA CCGATGAGGC TTCGGCGATG
GAATGGGCCG GCTATGCACC GAAGCTGGTG GAAGGGCGCG CCGACAACCT GAAGATAACC
ACCCCGGAAG ACCTACTGCG CCTGCAGCGA AGTTTTCCGC ACTGA
|
|---|
| Protein sequence | MTTSDLPAFW TVIPAAGVGS RMRADRPKQY LDLAGRTVIE RTLDCFLEHP MLRGLVVCLA
EDDPYWPGLD CAASRHVQRA AGGVERADSV LSGLLRLLEL GARADDWVLV HDAARPNLTR
GDLDRLLEEL AEDPVGGLLA VPARDTLKRS DRDGRVSETI DRSVVWLAYT PQMFRLGALH
RALADALVAG VAITDEASAM EWAGYAPKLV EGRADNLKIT TPEDLLRLQR SFPH
|
|---|
| |