Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1490 |
Symbol | rseP |
ID | 5354427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1511902 |
End bp | 1513254 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640810543 |
Product | RIP metalloprotease RseP |
Protein accession | YP_001346874 |
Protein GI | 152988658 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCGC TTTACATGAT CGTCGGCACC CTGGTGGCCC TGGGCGTGCT GGTGACGTTC CACGAGTTCG GCCACTTCTG GGTCGCGCGA CGCTGCGGGG TCAAGGTCCT GCGCTTCTCC GTCGGCTTCG GCACGCCGCT GCTGCGCTGG CACGACCGGC ACGGCACCGA GTTCGTGGTG GCGGCCATTC CGCTGGGCGG CTACGTCAAG ATGCTCGACG AACGCGAGGC GGAAGTACCG GCCCATCTGC TCGAACAGTC CTTCAATCGC AAGACGGTGC GTCAGCGGAT CGCCATCGTC GCGGCCGGTC CCATCGCCAA TTTCCTACTG GCGATTCTGT TCTTCTGGGT CGTCGCCCTG CTCGGCAGCC AGCAGGTACG CCCGGTTATC GGTTCCGTGG CGCCGGAGAG CCTGGCCGCC CAGGCCGGCC TGGAGGCCGG ACAGGAGCTG TTGGCGGTGG ATGGCGAGCC CGTCACCGGC TGGAACGGGG TCAACCTGCA GCTGGTTCGC CGTCTCGGCG AGAGCGGTAC GCTGGAAGTG CGGGTGCAGG AAAAAGGCTC GAATGTCGAT TCCACCCACC AGGTGCGTCT GGATGGCTGG CTGAAGGGCG AGGACAATCC CGATCCCATC GCCTCGCTGG GTATCCAGCC CTGGCGGCCG GCCTTGCCGC CGGTGCTGGC CGAGCTTGAC CCCAAGGGGC CGGCGCAGGC CGCCGGGCTG AAGGTCGGCG ACCGCTTGCA GGGCATCGAT GGCGTCGCCG TCGACGACTG GCAGCAGGTG GTGGACAGCG TCCGAGCCCG CCCCGGGCAG CGCGTCCAGC TCAAGGTTCT GCGCGACGGC GAAGTGCTGG ATATTGCCCT GGATCTGGCC TCGCGCGGCG AGGGCAAGGC CCGGACCGGC TACATGGGCG CGGGGGTTTC GGGCGGCGAA TGGCCGGCGG AAATGCTCCG CGAAGTGAGC TACGGACCGC TGGAGGCGGT GGGTCAGGCG CTTTCGCGAA CCTGGACCAT GAGCCTGCTA ACGCTCGACT CCATAAAGAA AATGTTGCTC GGCGAGCTCT CGGTAAAAAA CTTGAGCGGG CCGATAACCA TTGCTAAAGT GGCGGGCGCT TCAGCCCAGT CTGGCGTGGG GGATTTTCTC AATTTCCTGG CCTATCTGAG CATTAGCTTG GGGGTTCTCA ACCTGCTGCC GATCCCTGTC CTCGATGGCG GGCATCTGTT GTTCTATCTG GTTGAGTGGG TGCGCGGGCG CCCATTATCC GAACGGGTAC AGGCTTGGGG GATGCAGATC GGCATCAGTC TGGTCGTTGG CGTGATGTTG CTCGCTCTGG TCAACGATCT GAGTCGTCTG TAG
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Protein sequence | MSALYMIVGT LVALGVLVTF HEFGHFWVAR RCGVKVLRFS VGFGTPLLRW HDRHGTEFVV AAIPLGGYVK MLDEREAEVP AHLLEQSFNR KTVRQRIAIV AAGPIANFLL AILFFWVVAL LGSQQVRPVI GSVAPESLAA QAGLEAGQEL LAVDGEPVTG WNGVNLQLVR RLGESGTLEV RVQEKGSNVD STHQVRLDGW LKGEDNPDPI ASLGIQPWRP ALPPVLAELD PKGPAQAAGL KVGDRLQGID GVAVDDWQQV VDSVRARPGQ RVQLKVLRDG EVLDIALDLA SRGEGKARTG YMGAGVSGGE WPAEMLREVS YGPLEAVGQA LSRTWTMSLL TLDSIKKMLL GELSVKNLSG PITIAKVAGA SAQSGVGDFL NFLAYLSISL GVLNLLPIPV LDGGHLLFYL VEWVRGRPLS ERVQAWGMQI GISLVVGVML LALVNDLSRL
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