| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1429 |
|---|
| Symbol | |
|---|
| ID | 5355429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1448537 |
|---|
| End bp | 1450165 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640810482 |
|---|
| Product | putative chemotaxis transducer |
|---|
| Protein accession | YP_001346813 |
|---|
| Protein GI | 152988250 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.357089 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAACT GGACTGTTCG CCAGCGAATC CTGGCAAGTT TCGCCGTGAT CATCGCCATC
ATGCTGCTGA TGGCCGCTAC TTCGTACGTG AAGATGCTGA CGGTGGAGAA GGGCGCCTAC
CGCGTCCAGG ACGACGCCAT GCCGGGCATG TACTTCATCA CGCTGGTACG CAGCTCGTGG
ACCGACAATT ACCTGCAGAC CCAGGAGCTG TTCGGCATCA CCGACGACCA CGCACTGAGC
AAGGCCGAGG CCGACAGCAT CCTCGCCAGC GAGGAGCGGC TCGACCAGCA GATCGCCTCC
TACCAGAAGA CCATGAACCC GGACGAAGCC CGCGACCACG AACTGCTCGC CGGCTTCCTG
GGCGTGCGCA AGGCCTACCT GGAGCAGCAC GACAAGGTCC TGGAACTGTA TCGCGAGAAG
CGCTTCGAAG AGGCCGGCAA GCTCCTCGCC GGCCCGCTGA CCCAGCACTG GCGCGACGGA
CGCAAGTACC TCAACGAGAT GATCGAGCTG AACAAGGACA TCGCCGACCG CGCCTCGGAC
AACATCGTCA ACGCGGTCGA CGATGCCGAG TTGAGCATGC TGATCACCCT GCTGCTGGCG
GTGGCGGTGG CCGGCGTCTG CGGCTTCCTG CTGCTGCGCG CGATCACCCA GCCGATCCAG
AAGATCGTCC GCAGCCTCGA CCTGATGGCC GGCGGTGATC TCACCGCGCG CCTGGACCTT
GGCCGTCGCG ACGAGTTCGG CGCCATCGAG ACCGGTTTCA ACGGCATGGC CGAGGAGCTC
AAGGGCCTGG TGTCGCAGGC GCAGCGCTCG TCGGTGCAGG TGACCACCTC GGTCACCGAG
ATCGCCGCGA CCTCCAAGCA GCAGCAGGCC ACCGCCACCG AAACCGCCGC CACCACCACC
GAGATCGGCG CTACCTCCCG GGAGATTGCC GCCACGTCGC GCGACCTGGT GCGGACCATG
AGCGAGGTTT CCGGCGCCGC CGAGCAGACC TCGACCCTGG CCGGCTCCGG CCAGTTGGGC
CTGGCGCGCA TGGAGGAGAC CATGCACCAC GTGATGGGCG CGGCCGACCT GGTCAACGCC
AAGCTGGCGA TCCTCAACGA GAAGGCCGGC AACATCAACC AGGTGGTGAC CACCATCGTC
AAGGTCGCCG ACCAGACCAA CCTGCTCTCG CTGAACGCCG CCATCGAGGC GGAGAAGGCC
GGCGAGTATG GCCGCGGCTT CGCCGTGGTG GCCACCGAGG TGCGCCGGCT GGCGGACCAG
ACGGCGGTCG CCACCTACGA CATCGAGCAG ATGGTGCGCG AGATCCAGTC CGCCGTATCG
GCTGGGGTGA TGGGCATGGA CAAGTTCTCC GAGGAGGTTC GCCGCGGCAT CGCCGAGGTC
GGCCAGGTCG GCGAGCAGCT GTCGCAGATC ATCCAGCAGG TCCAGGCGCT CGCGCCGCGG
GTGCAGATGG TCAACGAGGG CATGCAGGCG CAGGCCACCG GCGCCGAGCA GATCAACCAG
GCGCTGGTGC AACTGGGCGA GGCCACCGGA CAGACCGTGG AATCGCTGCG CCAGGCCAGT
TTCGCCATCG ACGAGCTGAA CCTGGTGGCG AACGGGCTGC GCAACGGCGT ATCCCGCTTC
AAAGTCTGA
|
|---|
| Protein sequence | MKNWTVRQRI LASFAVIIAI MLLMAATSYV KMLTVEKGAY RVQDDAMPGM YFITLVRSSW
TDNYLQTQEL FGITDDHALS KAEADSILAS EERLDQQIAS YQKTMNPDEA RDHELLAGFL
GVRKAYLEQH DKVLELYREK RFEEAGKLLA GPLTQHWRDG RKYLNEMIEL NKDIADRASD
NIVNAVDDAE LSMLITLLLA VAVAGVCGFL LLRAITQPIQ KIVRSLDLMA GGDLTARLDL
GRRDEFGAIE TGFNGMAEEL KGLVSQAQRS SVQVTTSVTE IAATSKQQQA TATETAATTT
EIGATSREIA ATSRDLVRTM SEVSGAAEQT STLAGSGQLG LARMEETMHH VMGAADLVNA
KLAILNEKAG NINQVVTTIV KVADQTNLLS LNAAIEAEKA GEYGRGFAVV ATEVRRLADQ
TAVATYDIEQ MVREIQSAVS AGVMGMDKFS EEVRRGIAEV GQVGEQLSQI IQQVQALAPR
VQMVNEGMQA QATGAEQINQ ALVQLGEATG QTVESLRQAS FAIDELNLVA NGLRNGVSRF
KV
|
|---|
| |