| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1419 |
|---|
| Symbol | |
|---|
| ID | 5353789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 1434627 |
|---|
| End bp | 1436120 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640810472 |
|---|
| Product | N-acetylglucosamine-binding protein A |
|---|
| Protein accession | YP_001346803 |
|---|
| Protein GI | 152989568 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.28582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCACT CCCACCGCTC GCGCAGCATG AGCAAGCTTC CCCTCGCCCT GGCCATCGGC
CTGGCCGCCC TGTCCTCCCA GCAGGCGTTT TCCCACGGCT ACGTGGAAAG CCCGAAGTCC
CGCGCCTACA TGTGCAATGC CAAGGGTGGC AACCTGAACG CGAACTGCGG CGCGGTCACC
TACGAGCCAC AAAGCATCGA ATACGCGGAG GGCGCCAACC ATCACTACCC GAGCACCTAC
TGCCCCGGCG ACTTCACCCA GTGCGGCCCG GCCGATGGCA CCATTCCCGC CGGCGGCCTC
AACAACTTCG CCCCGCTGAA CGAGCAGACC GCCACCCGCT GGCAGAAGAC CACCCTCAAG
CCGGGCCTGA ACGAATTCCG CTGGCGCTTC ACCGCCGGCC ACGCCTCGGC CTATTACCAG
TTCTACATCA CCAAGAAGGA CTGGAACCCG AACCAGCCGC TGACCCGCGA TTCGTTCGAG
CTCAAGCCGC TGCTGAACCA GGATGCGGGC GGCGAGACTC CGCAGTCCGG CTCGAGCAAG
TCCTTCAACG TGAATATTCC CGGCGATCGC AGCGGCTACC ACGTGATCCT GGCCACCTGG
AGGATCGCCA ACACTTCCGC GACCTTCTAC CAGGCCATCG ACGTGAACAT CGACAACAAC
GCCGTGCCGC CGAGCGAATG GACCAGCATC GGCACCGTCC AGCCCGAACC GCTGCAGATC
GGCGACAAGG TGATGACCCG GGTCTTCACC AATGCCGGCG AGCAGGCCAA CCGCCAGACC
GTTCTGGACA TCGGCAGCGC CACCGAAGCC CAGGCCAACA CCTGGCCGTT CCTGCTCGCG
CAGAAGGCCA ACCAGGCCAA CGCCGGCTAC CGGATGGGCG TGCTCAACGC TGACGGCGAG
GTAGTCCCGA ACTATGGCGC CAACAGCATC TACACCAAGG CCGGCAGCGA TGTCGTCCGC
GTGGAGATCC AGAAGGACCA GCCGACCGTT CCCGGCGAGC TGAGCCTGTC CGGCCTGCAA
CCGAGCTACA CGCTGAAGGA CGGCGCCGCC GACCTGCACT TCACCGCCAT CGCCCAGGGT
GGCACCTACA CCATCGGCGC CACCGTGTTC AACGGCAAGG GCGAGAGCAT CGCCCACCAG
CAGGCCGAAG CCGGCAACAA CGCGCCGCAC TTCAGCATCC CGCTGCGCAA TGCCAGCGCC
GGTGACTATG ACCTGGTCGT GGTAGCCAAG CCGGAGAAAG GCGAACTGCT GCAGGAAACC
CAGCGTTTCA GCCTGAAGGC CGAGGACAAC GGCGGCAACG GCAAGTACGA CTTCGTGTTC
CCGGACGGCC TGTCCAGGTA CACCGCCGGT ACCACCGTAC TGGCGAAGGA CGGCAATACC
TATGCGTGCA AGCCGTTCCC GTACAGCGGC TTCTGCAAGC AGTGGAACGC CGGTTCCAAC
CAGTTCGAGC CCGGCGTCGG CTCCAGCTGG AAGGACGCCT GGATTCGCCG GTAA
|
|---|
| Protein sequence | MIHSHRSRSM SKLPLALAIG LAALSSQQAF SHGYVESPKS RAYMCNAKGG NLNANCGAVT
YEPQSIEYAE GANHHYPSTY CPGDFTQCGP ADGTIPAGGL NNFAPLNEQT ATRWQKTTLK
PGLNEFRWRF TAGHASAYYQ FYITKKDWNP NQPLTRDSFE LKPLLNQDAG GETPQSGSSK
SFNVNIPGDR SGYHVILATW RIANTSATFY QAIDVNIDNN AVPPSEWTSI GTVQPEPLQI
GDKVMTRVFT NAGEQANRQT VLDIGSATEA QANTWPFLLA QKANQANAGY RMGVLNADGE
VVPNYGANSI YTKAGSDVVR VEIQKDQPTV PGELSLSGLQ PSYTLKDGAA DLHFTAIAQG
GTYTIGATVF NGKGESIAHQ QAEAGNNAPH FSIPLRNASA GDYDLVVVAK PEKGELLQET
QRFSLKAEDN GGNGKYDFVF PDGLSRYTAG TTVLAKDGNT YACKPFPYSG FCKQWNAGSN
QFEPGVGSSW KDAWIRR
|
|---|
| |