Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1375 |
Symbol | rimM |
ID | 5356130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1389945 |
End bp | 1390472 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640810428 |
Product | 16S rRNA-processing protein RimM |
Protein accession | YP_001346759 |
Protein GI | 152985572 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACAC CCGCCGACGA CCTGGTCGTG ATCGGCAAGA TCGTTTCGGT GTACGGCATC CGCGGTGAGG TGAAGGTGTA TTCCTTTACC GACCCGTTGG ACAACCTGCT GGACTATCGC CGCTGGACGC TCCGGCGCGA CGGCGAGACC CGGCAGGCCG AGCTGGTCAG GGGGCGCCTG CATGGCAAGG TCCTGGCCGC CAAGCTCAAG GGGCTCGACG ATCGCGAAGA GGCCCGCACC TTCACCGGTT ACGAGATCTG CATCCCGCGT AGCGAGTTGC CCTCTCTCGA GGAAGGTGAG TACTACTGGT ACCAGCTGGA AGGCCTGAAG GTGATCGACC AGGGCGGGCA GTTGCTCGGC GTGATCGACC ATCTGCTGGA AACCGGTGCC AACGATGTCA TGGTGGTCAA GCCCTGCGCG GGCAGCCTGG ACGACCGCGA GCGCCTGTTG CCCTATACCG GGCAGTGCGT GCTGTCGATC GACCTGGCCG CTGGCGAGAT GCGGGTGGAC TGGGACGCGG ACTTCTGA
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Protein sequence | MPTPADDLVV IGKIVSVYGI RGEVKVYSFT DPLDNLLDYR RWTLRRDGET RQAELVRGRL HGKVLAAKLK GLDDREEART FTGYEICIPR SELPSLEEGE YYWYQLEGLK VIDQGGQLLG VIDHLLETGA NDVMVVKPCA GSLDDRERLL PYTGQCVLSI DLAAGEMRVD WDADF
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