| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1286 |
|---|
| Symbol | |
|---|
| ID | 5354847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1302579 |
|---|
| End bp | 1304144 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640810339 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001346671 |
|---|
| Protein GI | 152987292 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATTC CGGTGAGGCG AGCCCGGCGC AAGGCGCTGC GGCTGTTGTT GTCCGTCCTG
GTCGGGATGC TGCCGATCCT TCTCGGCCTG CTGATCCTCT ATTGGCAGGC CGGGCGCAGC
CTCCAGCTGA CCTCCGAGCA GGCTGCCGGG AACGCGGTGC GGCAATTCGA GCGGATGCTC
GACAACGCCG CGCTGGCCGC GCGCAACGTC ATGCCGGTGG CGGGGCGCCC GTGCCCCGAG
GCCGAGCTGG CGTTGCGCGA GCAGGTGGCG ACCATGCCGT TCGTTCGCTC GGTAAACCTG
ACGCGCGACC GCACCATCTA TTGCACCTCG CTGTTCGGTG GCTTCGACGA GCCGGTACGG
ATCGACAGCT ACGTCGACGG ACGCCTTCGG CTGATGCCCG GCAACCAGGT GACGCCGGAC
TCGGCGCTGC TGGTGCTGCG CGATTCGGAC GGCCGTCGCG GCGTGCTGTC GGCGATCGAC
GGGCGCTATC TGAGCTACGT GCTTGACCTG GTCGATCGGC GCAGTCGCCA GGTCCTGGTG
GTCGGGCCCC ACTGGCTGGA CGCCGAGGGC CGCACGCACC GCGATGCGCC GCCGCTCTAT
GCGGTGGCCG CCCAGGATCT CGCCTCGCAG CGCTACCCGT TCCGGGTCCT GTCGGGCTTC
CCGGAGGGCG AGCAGTGGCG CTCGATCCGC TCGCAGAACC CGGCGATGTT CGGCCTGCTG
CTGTTCTTCG GCGCCCTGGC CGGTACCCTC TGCTACTGGC TGTCGCGGCG CGTCGCCTCG
CCCAGCGGCG AGTTGCGCCG GGCTCTCGAC GCCAACGAGT TCATTCCCTA CTACCAGCCG
TTGAGTCCCG GCCAGGGCGG CGCCTGGATC GGTGTCGAGG TCCTGATGCG CTGGCGCCAT
CCGCGCGAGG GCCTGATCCG GCCGGACCTG TTCATCCCCT TCGCCGAGCG TTCGGGGCTG
ATCGTACCGA TGACGCGCGC GCTGATGCGC CAGGTCGCGG AAGACCTGGG CGGGCATGCC
GGGAAGCTGG AGCCGGGCTT CCACATCGGT TTCAACATCA GCGCCACCCA TTGCCACGAA
CTGGCGTTGG TGGACGACTG TCGCGAATTG TTGGCGGCGT TTCCGCCCGG ACACATCACC
CTGGTCCTGG AGCTGACCGA GCGCGAGCTG ATCGAGTCGA GCGCGGTTAC CGATCGGCTG
TTCGCCGAAC TGCACGAACT GGGGGTGAAG ATCGCCATCG ACGACTTCGG CACCGGCCAT
TCCAGCCTGG CCTACCTGCG CAAGTTCCAG GTGGACTGCC TGAAGATCGA CCAGAGCTTC
GTCGCCCGCA TCGGCATCGA TACCCTCTCC GGACACATCC TCGACAGCAT CGTCGAACTC
TCCGCCAAGC TCGACCTGGA TATCGTCGCC GAAGGCGTGG AGACTCCCGA GCAGCGTGAC
TACCTGGCCG CCCGCGGGGT GGATTACCTG CAAGGCTACC TGATCGGCCG GCCGATGCCG
CTGGAGAGTT TTCTTGCCAG CCTGAGTGCA CAAGCTGACC AGCCAGCGTT CGTGGCCGGA
CACTAA
|
|---|
| Protein sequence | MPIPVRRARR KALRLLLSVL VGMLPILLGL LILYWQAGRS LQLTSEQAAG NAVRQFERML
DNAALAARNV MPVAGRPCPE AELALREQVA TMPFVRSVNL TRDRTIYCTS LFGGFDEPVR
IDSYVDGRLR LMPGNQVTPD SALLVLRDSD GRRGVLSAID GRYLSYVLDL VDRRSRQVLV
VGPHWLDAEG RTHRDAPPLY AVAAQDLASQ RYPFRVLSGF PEGEQWRSIR SQNPAMFGLL
LFFGALAGTL CYWLSRRVAS PSGELRRALD ANEFIPYYQP LSPGQGGAWI GVEVLMRWRH
PREGLIRPDL FIPFAERSGL IVPMTRALMR QVAEDLGGHA GKLEPGFHIG FNISATHCHE
LALVDDCREL LAAFPPGHIT LVLELTEREL IESSAVTDRL FAELHELGVK IAIDDFGTGH
SSLAYLRKFQ VDCLKIDQSF VARIGIDTLS GHILDSIVEL SAKLDLDIVA EGVETPEQRD
YLAARGVDYL QGYLIGRPMP LESFLASLSA QADQPAFVAG H
|
|---|
| |