Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1277 |
Symbol | |
ID | 5359475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1292195 |
End bp | 1293172 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640810330 |
Product | ABC transporter periplasmic protein |
Protein accession | YP_001346662 |
Protein GI | 152984310 |
COG category | [R] General function prediction only |
COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCAGG CCTATAAGAA TAAATGGTTG CCCCTCAGTG CCCTGGCCCT TGGCATGGCC CTGTCCTTCG GCGCCAACGC CGACGAGCAG AAGTCGGTCG CCGTGACCGC CATCGTCGAG CACCCGGCGC TGGATGCCGC CCGCGACGGG GTCAAGGAAG CCCTCCAGGA GGCCGGCTAC GAAGACGGCA AGAACCTCAA GTGGCAGTAC CAGAGCGCCC AGGGCAACAC CGGCACCGCC GCGCAGATCG CCCGCAAGTT CATCGGCGAC AAGCCCGACG TGATCGTCGG TATCGCCACC CCCTCGGCCC AGGCGCTGGT GGCCGCGACC AAGAGCATTC CGATCGTCTT CAGCACCGTC ACCGACCCGG TCGGCGCGCA CCTGACGCCG AGCTGGGAAG CCTCCGGCAC CAACGTCACC GGGGTTTCCG ACATGCTCGC GCTGGACAAG CAGATCGAGC TGATCAAGAA AGTGGTGCCG GGCGCCAAGC GCATCGGCAT GGTCTACAAC CCCGGCGAAG CCAACTCCGT GGTGGTGGTC AAGGAACTCA AGGAACTGCT GCCGAAGATG GGCCTGAGCC TGGTCGAGGC CTCGGCCCCG CGTTCGGTGG ACGTCAGTTC GGCGGCGCGC AGCCTGGTCG GCAAGGTCGA CGCGATCTAC ACCAACACCG ACAACAACGT GGTGTCCGCC TACGAGGCGC TGGTCAAGGT CGGCAACGAC GCGAAGATCC CGCTGATCGC CTCCGACACC GACAGCGTCA AGCGCGGCGC GATCGCCGCC CTCGGCATCA ACTACAAGGA GATGGGCAAG CAGACCGGCC GCATGGTGGT GCGCATCCTC AAGGGCGAGA AGCCGGGCGA GATCAAGCCG GAGACCAGCG ACAAGCTGCA ACTCTTCGTC AACCCGGGGG CCGCGCAGAA GCAAGGCGTG ACCCTGTCCG ACGAGCTGGT CAAGTCGGCC GCGGAAGTCA TCCAGTAA
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Protein sequence | MMQAYKNKWL PLSALALGMA LSFGANADEQ KSVAVTAIVE HPALDAARDG VKEALQEAGY EDGKNLKWQY QSAQGNTGTA AQIARKFIGD KPDVIVGIAT PSAQALVAAT KSIPIVFSTV TDPVGAHLTP SWEASGTNVT GVSDMLALDK QIELIKKVVP GAKRIGMVYN PGEANSVVVV KELKELLPKM GLSLVEASAP RSVDVSSAAR SLVGKVDAIY TNTDNNVVSA YEALVKVGND AKIPLIASDT DSVKRGAIAA LGINYKEMGK QTGRMVVRIL KGEKPGEIKP ETSDKLQLFV NPGAAQKQGV TLSDELVKSA AEVIQ
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