| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1158 |
|---|
| Symbol | |
|---|
| ID | 5358534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1153680 |
|---|
| End bp | 1155023 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640810212 |
|---|
| Product | ATP-dependent RNA helicase |
|---|
| Protein accession | YP_001346544 |
|---|
| Protein GI | 152986565 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0413431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTCG CCTCCCTCGG TCTGCTCGAC CCCCTGCTCA AGGCCCTCGA AGGGCTCGGC
CTGCACACGC CCACGCCGAT CCAGGCCCAG GCCATTCCGC CGGCGCTCAA GGGCCGCGAC
CTGCTCGCAG CGGCCCAGAC CGGCACCGGC AAGACCGCCG CTTTCGCCCT GCCGCTGCTG
CAGCGGCTGA CCCTGGAGGG GCCGCAGGTC GCAGCCAACT CGGTGCGCGC ACTGGTACTG
GTTCCGACCC GCGAACTGGC CGAGCAGGTC CACGGCAGTA TTCGCGACTA CGGCCAGCAC
CTGCCGCTGC GTACCGCGGT GGCCTATGGC GGGGTCAGCA TCAATCCGCA GATGATGAAG
CTGCGCAAGG GCGTGGACGT CCTCGTCGCC ACCCCGGGCC GCCTGCTCGA CCTGTACCGG
CAGAACGCGG TGCAGTTCGC CCGGCTCCAG GCGCTGGTGC TGGACGAGGC CGATCGCATG
CTCGACCTCG GTTTCGCCCG CGAGCTGGAC GAGCTGTTCG CCGCGCTGCC GCGCAAGCGC
CAGACCCTGC TGTTCTCCGC GACCTTCTCC GACGCCATCC GCACGTTGGC CGGCGAACTG
CTGCGCGACC CGCTGTCCAT CGAGGTCAGT CCGCGCAATA CCGCGGCGAA GAGCGTCAGG
CAATGGCTGG TGCCGGTGGA CAAGAAGCGC AAGGCCGAGC TCTTCTGTCA CCTGTTGCAG
GCCAATCGCT GGCGCCAGGC GCTGGTCTTC GCCAAGACCC GGAAGAGTGT CGAGGAACTG
GTCGGATTGC TGCAGCGGCA GGGTATCGCC GCCGACTCGA TCCATGGCGA CAAGCCGCAG
CCGGCGCGAT TGCGCGCGCT ACAGCGATTC AAGGCCGGCG AGGTCGACCT GCTGGTGGCC
ACCGACGTCG CCGCGCGAGG CCTGGACATC GAGGAAATGC CGCTGGTGGT CAACTTCGAC
CTGCCGATCG TCGCCGAGGA CTACGTGCAC CGGATCGGCC GCACCGGCCG CGCCGGCGCT
ACCGGCCAGG CGCTGTCGCT GGTCTGCGCC GACGAGGTGG AACTGCTGGC GGCGATCGAG
ACGCTGATCG GCCAGACCCT GCAGCGCCGC GAAGAGCCCG ACTTCGAGCC GGAGCACCGG
GTGCCGCAGA CCGCGCCGGG TGGGGTGGTG CTGAAGAAAC CGAAGAAGCC GAAGAAAACC
AAGGCCGCCG AGGCCACCGG CAAGCCCGGC CAGATCCACC TGGGCACCTG GTTCGACAGC
AGCGCGCCGA AGGTCAGGGC GGTACGCAAG GCGCCGGGCT TCGGCGCGGC GGGCAAGCCG
AAGAAGCGGC CGTCCGGGAA GTAG
|
|---|
| Protein sequence | MTFASLGLLD PLLKALEGLG LHTPTPIQAQ AIPPALKGRD LLAAAQTGTG KTAAFALPLL
QRLTLEGPQV AANSVRALVL VPTRELAEQV HGSIRDYGQH LPLRTAVAYG GVSINPQMMK
LRKGVDVLVA TPGRLLDLYR QNAVQFARLQ ALVLDEADRM LDLGFARELD ELFAALPRKR
QTLLFSATFS DAIRTLAGEL LRDPLSIEVS PRNTAAKSVR QWLVPVDKKR KAELFCHLLQ
ANRWRQALVF AKTRKSVEEL VGLLQRQGIA ADSIHGDKPQ PARLRALQRF KAGEVDLLVA
TDVAARGLDI EEMPLVVNFD LPIVAEDYVH RIGRTGRAGA TGQALSLVCA DEVELLAAIE
TLIGQTLQRR EEPDFEPEHR VPQTAPGGVV LKKPKKPKKT KAAEATGKPG QIHLGTWFDS
SAPKVRAVRK APGFGAAGKP KKRPSGK
|
|---|
| |