Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1119 |
Symbol | holA |
ID | 5354469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1115750 |
End bp | 1116787 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640810173 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_001346505 |
Protein GI | 152989624 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.774232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTGA CTCCCGCGCA ACTCGCCAAA CACCTCCAGG GCCCACTGGC AGCGGTCTAT GTCGTCAGTG GCGACGAACC GCTGCTATGC CAGGAAGCCT GCGACGCCAT TCGCCAGGCC TGCCGCGAAC GCGACTTCGG CGAGCGCCAG GTGTTCAATG CGGAAGCCAA CTTCGACTGG GGCCTGCTGC TGGAAGCTGG CGCCAGCCTG TCGCTGTTCG CCGAGAAGCG CCTGATCGAA CTGCGCCTGC CCTCCGGCAA GCCCGGCGAC AAGGGCGCGG CGATTATCCA GGAATACCTG CAGCGGCCAC CGGAAGACAC CGTGTTGCTG CTGAGCCTGC CCAAGCTCGA CGGCAGTACG CAGAAAACCA AGTGGGCCAA GGCCCTGATC GATGGCGGCG CCGCGCAGTT CATCCAGGTC TGGCCGGTCG ACGTCCATCA GTTGCCGCAG TGGATTCGCC AGCGCCTGTC CCAGGCCGGG CTGTCCGCCA GCCCCGAAGC CCTGGAGCTG ATCGCCGCGC GGGTAGAAGG CAACCTCCTC GCCGCCGCCC AGGAAATCGA AAAGCTCAAG CTGCTCGCCG AGGGCAACCA GATCGACGCC GCCACCGTCC AGGCCGCGGT CGCCGACAGC GCACGCTTCG ATATCTTCGG CCTGATCGAC GCGGCCCTGG GCGGCGAAGC CGCCCATGCC CTGCGCATCC TCGAAGGGCT GCGTGGCGAG GGCATCGAAC CACCGGTGAT CCTCTGGGGT CTGGCCCGGG AGATCCGCCT GCTGGCTGGC CTGGCCCAGC AATACGGGCA GGGCATTCCC CTGGAAAAGG CCTTCGCCCA GGCACGCCCG CCGGTCTGGG ACAAGCGCCG GCCGCTGCTG ACCCGCGCCC TGCAGCGCCA CTCGAGCAGC CGCTGGAACC AGATGCTGCG CGACGCCCAG TTGATCGACG CGCAGATCAA GGGCCAGGCG CCCGGCAGCC CCTGGAGCGG CCTCTCGCTT CTCACCCTGA CCCTCGCAGG CCAGCGTCTC GGCCTGCCGG CAGCCTGA
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Protein sequence | MKLTPAQLAK HLQGPLAAVY VVSGDEPLLC QEACDAIRQA CRERDFGERQ VFNAEANFDW GLLLEAGASL SLFAEKRLIE LRLPSGKPGD KGAAIIQEYL QRPPEDTVLL LSLPKLDGST QKTKWAKALI DGGAAQFIQV WPVDVHQLPQ WIRQRLSQAG LSASPEALEL IAARVEGNLL AAAQEIEKLK LLAEGNQIDA ATVQAAVADS ARFDIFGLID AALGGEAAHA LRILEGLRGE GIEPPVILWG LAREIRLLAG LAQQYGQGIP LEKAFAQARP PVWDKRRPLL TRALQRHSSS RWNQMLRDAQ LIDAQIKGQA PGSPWSGLSL LTLTLAGQRL GLPAA
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