| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1016 |
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| Symbol | |
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| ID | 5356589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 1014672 |
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| End bp | 1017200 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640810070 |
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| Product | usher CupB3 |
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| Protein accession | YP_001346402 |
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| Protein GI | 152988288 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGCCGG CGACGCCTGC CGCCAGGGGC GCGCCGCCGC GCCGGATCGT CTTCGATGCG
CAGATGCTGT CGCTGGGAGC GGGGGGCCGC GCCATCGACA CTTCGCGCTT CGAGCGCGGC
AACGTCATCG AGCCGGGGCG CTATCGTCTC GACCTGCTGG TCAACAACCA GTGGCGGGGT
GTCGAGGACG TCGAGTTGCG CCGCGAGCCG GGCCAGGACA GCGCGGTGCT CTGCTACGAC
CGGCGCCTGC TGGAGCGGGC CGGTATCGAC CTGGCCAGGA GCGCGCGCGG GCAGGACGGC
GTTTCCGGCG GCGTCCCGCT GCCCGAGGGA CTGGCCTGCG AGCCACTGGC GCGCCACGTG
CCGGGCGCCA CAACCAGGCT GGACATCGCC GAGCAGGCCA TCTATCTCTC GGTGCCCGAG
TTTTACCTGA GCCTGGCCTC CTCGAAGACC TACGTCGATC CGTCGAGCTG GGACAACGGC
ATTTCCGCCG CGCTGCTCAA CTACAACGCC AGCCTCTACA ACACCGATAC CCGCGGCAGG
AGCGACACCA GCGGTTATGC CGGGCTGAAC GCCGGCCTGA ATCTGGGCCG GCTGCGCCTG
CGCCACAACG GCACGGCCAC CTGGTCGCGG CGCAACGGCA GCCACTACCA GCGCAGCGCC
ACCTACGGCC AGACCGATCT TCCGGCCTGG CGCTCGCAAC TGCTGGTGGG GGAAAGTTCG
ACCAGCAGCG AGTTCTTCGA CCCGGTGTCG TTCCGTGGCG CGCGGCTTTC CAGCGACGAC
CGGATGCTGC CCGACTCGCT GCGCTATTAC GCGCCGGTGG TGCGCGGAAC GGCCAACACC
AATGCGCGGG TCTCGGTCTA CCAGCGCGGC TACCTGATCT ACGAGACCAC CGTGGCCCCC
GGCGCCTTCG CCCTCGACGA ACTGCAGGCC GCAAGCTTCG GCGGCGACCT GGAAGTGCGA
GTGGCCGAGG CCAGTGGCGA GGTGCGCACC TTCATCGTGC CGTTCGCCAC CACGGTACAA
CTGCTGCGTC CCGGCACCAC GCGCTACAGC CTGACCGCCG GGCAGGTCAA CGATCCCAGC
CTGGAGCGGC GACCGAACCT GGTGCAAGGC GTCTACCAGC GCGGCCTGGG CAACGACCTG
ACCGCCTATG GGGGCGGGGC CTTCACCGGC AGCTACATGT CGGCGCTGCT GGGCCTGGCC
CTGAACACGC CGATCGGCGG CTTCGCCGGG GACGTGACGC TGGCGCGAAC CGACGTGCCC
GGCGGTGGCG GCCAGTTGAA CGGTTCGAGC TACCGGCTTT CCTACAGCAA GAACCTGCCG
AACACCGGCA CCAACTTCTC GCTGCTCGCC TACCGCTATT CCACCAGTGG CTACCTGGGG
CTGCGCGACG CGGTGTTCAT GCAGGACCGG GTGGACAGGG GCGAGCCGCT GGAGTCGTTC
TCGCGCCTGC GCAATCGCGT GGATGCCAAC ATCAGCCAGC AGCTCGGCGC CGGCGGGGGC
CACCTGTACC TCAACGGTTC CGCGCAGCGC TACTGGAGCC ATGGTGGCCG GGCCGTGAAC
TTCTCGGTCG GCTACAGCAA CCAGTGGCGC GACGTCAGCT ATACCCTCTC CGCGCAACGT
CTGCGCAGCC AGTACGAGGG CTTCTCCGAC CGTGAGCGCG GCGGCGCCAG CAGTACCCTG
TTCAGCCTGA GCGTTTCCAT TCCGCTGGGC GGTCCCGGCC GTGGCTCGCC GACCCTGAGC
AGCTACCTCA CCCATGACAG CGCCAGCGGC ACGCAGCTCA CCAGTGGGGT GTCCGGCCTG
CTGGGCAGGC GCGATGAGCT TTCCTACGCG CTGTCGGCCT CCCACGATCG CGAGCGCGGA
GAGACCTCGA AGAACGCCAG CCTCGACTAC CGCCTGCCGC AGGTGGAACT GGGTTCGAGC
CTGTCGCAGG GCCCGGGTTA TCGCCAGGTG TCGCTCAAGG CGTCCGGCGG CCTGGTCGCC
CATGCCGGCG GGCTCACCGC CACCCAGATG CTGGGCGAGA CCATTGCCCT GGTGCATGCC
GCCGATGCCC TGGGCGCACG CGCCGGCTAT GCCGGCAACA GGGTCGACCG CAGTGGCTAC
GCGGTGGTCC CCAACCTGAT TCCCTACCAG TCGAACAGTA TCGACCTCGA TCCCCTCGGG
ATGCCCGAGG CGGTGGAACT GAAGGCCAGC TCGCGCAACG TGGCGCCCAC CGCCGGGGCG
GTGGTGCGCC TGGAGTATCC GACGCGGATC GCCCGCCCGC TGCTGGTCGA CAGCCGGATG
CCCAGCGGCG AGCCGCTGCC CTTCGCCGCG GAAGTCGTCG ATGCGCAGAG CGGAGAGAAC
GTCGGTGCCG TCGGCCAGGG CAGCCGCCTG GTGCTGCGCG TCGAACGGGA ACGCGGCACG
TTGCGCGTGC GCTGGGGCGA CGCGCCCGAC CAGCAGTGCC TGCTGGACTA TGCGTTGCCG
GCGCGCGCGC AGACCTCGAC GGTCCTGAAG CTGGCGTGCC GGCCGGTGGC CGGAGGACTG
CGCTCGTGA
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| Protein sequence | MLPATPAARG APPRRIVFDA QMLSLGAGGR AIDTSRFERG NVIEPGRYRL DLLVNNQWRG
VEDVELRREP GQDSAVLCYD RRLLERAGID LARSARGQDG VSGGVPLPEG LACEPLARHV
PGATTRLDIA EQAIYLSVPE FYLSLASSKT YVDPSSWDNG ISAALLNYNA SLYNTDTRGR
SDTSGYAGLN AGLNLGRLRL RHNGTATWSR RNGSHYQRSA TYGQTDLPAW RSQLLVGESS
TSSEFFDPVS FRGARLSSDD RMLPDSLRYY APVVRGTANT NARVSVYQRG YLIYETTVAP
GAFALDELQA ASFGGDLEVR VAEASGEVRT FIVPFATTVQ LLRPGTTRYS LTAGQVNDPS
LERRPNLVQG VYQRGLGNDL TAYGGGAFTG SYMSALLGLA LNTPIGGFAG DVTLARTDVP
GGGGQLNGSS YRLSYSKNLP NTGTNFSLLA YRYSTSGYLG LRDAVFMQDR VDRGEPLESF
SRLRNRVDAN ISQQLGAGGG HLYLNGSAQR YWSHGGRAVN FSVGYSNQWR DVSYTLSAQR
LRSQYEGFSD RERGGASSTL FSLSVSIPLG GPGRGSPTLS SYLTHDSASG TQLTSGVSGL
LGRRDELSYA LSASHDRERG ETSKNASLDY RLPQVELGSS LSQGPGYRQV SLKASGGLVA
HAGGLTATQM LGETIALVHA ADALGARAGY AGNRVDRSGY AVVPNLIPYQ SNSIDLDPLG
MPEAVELKAS SRNVAPTAGA VVRLEYPTRI ARPLLVDSRM PSGEPLPFAA EVVDAQSGEN
VGAVGQGSRL VLRVERERGT LRVRWGDAPD QQCLLDYALP ARAQTSTVLK LACRPVAGGL
RS
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