Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0999 |
Symbol | |
ID | 5355412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1001292 |
End bp | 1002017 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640810053 |
Product | putative short-chain dehydrogenase |
Protein accession | YP_001346385 |
Protein GI | 152985092 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTTCC AGAAAGATCT CTACGCCGGC CAGCAGGTGC TGGTCACCGG CGGCAGCTCC GGCATCGGCG CGGCCATCGC CATGCAGTTC GCCGAACTCG GCGCCGAAGT CGTCGCCCTC GGCCTGGATG CCGACGGCGT GCACGCCCCG CGCCACCCGC GGATTCGCCG GGAAGAACTG GACATCACCG ACAGCCAGCG CCTGCAACGG CTGTTCGAAG AGCTACCGCG CCTGGATGTG CTGGTGAACA ACGCCGGCAT CAGCCGCGAC CGCGAGGAAT ACGACCTGGC TACCTTCGAA CGGGTGCTGC GCCTCAACCT GAGCGCCGCC ATGCTCGCCA GCCAGCTGGC CCGGCCGCTG CTTGCGCAGC GCGGTGGCAG CATCCTCAAC ATCGCCTCGA TGTACAGCAC CTTCGGCTCC GCCGACCGCC CGGCCTACAG CGCCAGCAAG GGCGCGATCG TCCAACTGAC CAGATCGCTG GCCTGCGAGT ACGCCGGCCA GCGCATCCGG GTCAACGCCA TCGCCCCCGG CTGGATCGAC ACGCCGCTGG GCGCCGGGCT CAAGGCCGAC GCCGAAGCCA CCCGGCGGAT CATGCAGCGC ACGCCGCTGG CGCGCTGGGG CGCAGCGGCC GAGGTGGCCA GCGCCGCGGC CTTCCTCTGC GGTCCCGGCG CCAGCTTCGT CACCGGCGCC GTGCTGGCGG TGGACGGCGG CTACCTCTGC GCCTGA
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Protein sequence | MVFQKDLYAG QQVLVTGGSS GIGAAIAMQF AELGAEVVAL GLDADGVHAP RHPRIRREEL DITDSQRLQR LFEELPRLDV LVNNAGISRD REEYDLATFE RVLRLNLSAA MLASQLARPL LAQRGGSILN IASMYSTFGS ADRPAYSASK GAIVQLTRSL ACEYAGQRIR VNAIAPGWID TPLGAGLKAD AEATRRIMQR TPLARWGAAA EVASAAAFLC GPGASFVTGA VLAVDGGYLC A
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