Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0997 |
Symbol | |
ID | 5354294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 999903 |
End bp | 1001261 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640810052 |
Product | hypothetical protein |
Protein accession | YP_001346384 |
Protein GI | 152983705 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3659] Carbohydrate-selective porin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAGCGGA CAGCGATTCG CACGACAGAA CAACAACAAG ACGAGTGCCT TGCCATGAAA ACCCTCCGTA CCCTGCCGGC GCTGTTCTGC GCCGGTCTCC TCGGCCTGTC CGCGCAGGCC GCCGAAAGTC CCCGCGGCGG TCCGCTGGCC GGTCTCGGCG CACAGCTCGA ACGGCATGGC GTGAAGACCC ACGCGCAGTT CTGGAGCCTG TCGCTGAAGA ACCTCGACAC CGGTCCGCGC CCGCACAGCT TCGGCAACAG CGGCGACCTG TTCCTCGGCG CCGATCTCGA CCTCGCGACC CTTGCCGGCA TCGACGGCGC CTCGCTGCAT GTCGAGGAGA CCGTGTTCAT CCTCGACCGT GGCACCGGCC AGCCCACCGG GCCGAGCTGG CAGGGCGCGG TGGGCAGCTA TTTCGGCGGC GCGCCGCTGC ACAACGACAT CGGCGCCAAC CAGCTGAGCC TGCTCACCTG GCAGCAGAAA TGGCTGGACG GACGCCTCGC CAGCCACCTC GGACGGACCA ATGCGCGGCG CTACTTCCTG GTCTACAACT GCGAGACCGT GGTCACCTGC AACGACCCGG TCATCGACGC CTCCACCGGT ATCCTGCCGC CACCCTACGG CGCCTGGGGC GGCTACCTGA AATACCAGGC GACCCCGGCG CTGTACCTGC ACGCCGGGGC CTTCGAGTCC AACCCGGTGG ATTACCTGAA GAAGCGCCAC GGCCTCGACT TCAGCACCGA CGACGCCAGC GGCACCAGCC TGCTGCTGGG GATCGGCGAC AAGCGCGAGG AAAGCCTCGA TCCCTACCGC TCGCACTACG AACTCAACGC CTACCTGAAC ACCGCCAGCC AGGTCGACCC GCTCACCGGC GCCCGCGACC ACGGCAGTGC CGGCGGGTTC TTCAAGTTCC AGCAGCTGTT CTGGCGCGCC GACGGCGGCC GCCTCGACTC GCCACGGGCG CTGGGGATGT TCGGCTCGCT CTCGGTGTCG GCCGACGCCA AGCAGCCGTT CCGCCACTTC GCCGAGCTGG GCCTGACCTA CTACGCGCCC TTCGACCGGC CGCTGGACAA GCTCAACCTC AAGGCCAGCT ACCTGCGCCT GAACGACCAC CAGCTGGAAT TCCAGCGCCA GGCGCGAGTC GCCGCCGGCG GCGATCCGCG CCTGGGCCAG CGCGACGTGT ACGCCCTGGA AACCAATGCG CACATCGCCC TGACCCCGCA CATCGCCCTG GAACCCTCGG TGCAGTACAT CTTCAACCCG GACAACTACT ACAACCCCGG CGCCCGCGAA CTGAGCGGCG ACGGTTTCGT CGTCGGCCTG CAACTGATGG TCGACATGGG CTCGCTGCTG GGGCTTTAG
|
Protein sequence | MERTAIRTTE QQQDECLAMK TLRTLPALFC AGLLGLSAQA AESPRGGPLA GLGAQLERHG VKTHAQFWSL SLKNLDTGPR PHSFGNSGDL FLGADLDLAT LAGIDGASLH VEETVFILDR GTGQPTGPSW QGAVGSYFGG APLHNDIGAN QLSLLTWQQK WLDGRLASHL GRTNARRYFL VYNCETVVTC NDPVIDASTG ILPPPYGAWG GYLKYQATPA LYLHAGAFES NPVDYLKKRH GLDFSTDDAS GTSLLLGIGD KREESLDPYR SHYELNAYLN TASQVDPLTG ARDHGSAGGF FKFQQLFWRA DGGRLDSPRA LGMFGSLSVS ADAKQPFRHF AELGLTYYAP FDRPLDKLNL KASYLRLNDH QLEFQRQARV AAGGDPRLGQ RDVYALETNA HIALTPHIAL EPSVQYIFNP DNYYNPGARE LSGDGFVVGL QLMVDMGSLL GL
|
| |