| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0891 |
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| Symbol | |
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| ID | 5356151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 888591 |
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| End bp | 891680 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640809945 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001346277 |
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| Protein GI | 152985133 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.668261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTA CCGACCTGTT CGTCCGCCGG CCGGTGCTGG CGCTGGTGGT CAGCACGCTG
ATCCTGCTGC TCGGCCTGTT CTCCCTGGGC AAGCTGCCGA TCCGCCAGTA TCCGCTGCTG
GAAAGCTCGA CCATCACCGT CACCACCGAA TATCCCGGCG CCTCCGCCGA CCTCATGCAG
GGCTTCGTCA CCCAGCCGAT CGCCCAGGCG GTGTCCTCGG TGGAAGGCAT CGACTACCTG
TCCTCGACCT CGGTGCAGGG GCGCAGCGTG GTGACCATCC GCATGCTGCT CAACCGCGAC
TCGACCCAGG CGATGACCGA GACCATGGCC AAGGTCAACT CGGTGCGCTA CAAGCTGCCC
GAGCGTGCCT ACGACTCGGT GATCGAGCGC TCTTCCGGCG AGACCACCGC GGTGGCCTAT
GTCGGCTTCT CCAGCAAGAC CCTGCCGATC CCGGCGCTGA CCGATTACCT GTCGCGGGTG
GTCGAGCCGA TGTTCTCCTC CATCGACGGC GTGGCCAAGG TCCAGACCTT CGGCGGCCAG
CGCCTGGCCA TGCGCCTCTG GCTCGACGCC GATCGCCTCG CCGGGCGCGG CCTGACCGCC
TCCGACGTGG CCGAGGCGAT CCGCCGCAAC AACTACCAGG CCGCGCCGGG AATGGTGAAG
GGTCAGTACG TGCTGTCCAA CGTGCGGGTC AACACCGACC TGACCAATGT CGACGACTTC
CGCGAGATGG TCATCCGCAA CGATGGCAAC GGCCTGGTCC GCCTGCGCGA TGTCGGCACC
GTCGAGCTGG GCGCCGCGGC CACCGAGACC AGCGCGCTGA TGGACGGCGA ACCGGCGGTG
CACCTGGGGC TGTTCCCGAC GCCCACCGGC AACCCGCTGG TGATCGTCGA CGGCATCCGC
AAGCTGCTGC CGGAGATCCA GAAGACCCTG CCGCCGGACG TCCGCGTCGA CCTCGCCTAC
GAGACCTCGC GCTTCATCCA GGCGTCCATC GACGAGGTGG TGCGGACCCT GGTCGAGGCC
CTGGTGATCG TGGTGCTGGT GATCTACCTC TGCCTCGGCT CGCTGCGCAG CGTGCTGATC
CCGGTGGCGA CCATTCCCCT GTCGATGCTC GGCGCCGCCG CGCTGATGCT GGCCTTCGGC
TTCAGCGTCA ACCTGCTGAC CCTGCTGGCG ATGGTGCTGG CCATCGGGCT GGTGGTGGAC
GACGCCATCG TGGTGGTGGA GAACGTCCAC CGCCACATCG AGGAAGGCAA GTCGCCGGTG
GCGGCGGCGC TGATCGGCGC CCGCGAAGTG GCCGGCCCGG TGATCGCCAT GACCATCACC
CTGGCCGCCG TATATACCCC CATCGGCCTG ATGGGCGGCC TCACCGGCGC GCTGTTCCGC
GAGTTCGCCC TGACCCTGGC CGGCGCGGTG ATCGTTTCCG GGGTGGTGGC GCTGACCCTG
TCGCCGGTGA TGAGTTCGCT GCTGCTCCAG GCCCACCAGA ACGAGGGCCG CATGGGCCGC
GCCGCCGAAT GGTTCTTCGG CGGCCTGACG CGGCGCTACG GGCAGGTCCT GGAATTCTCC
CTGGGCCACC GCTGGCTGAC CGGCGGCCTG GCATTGCTGG TGTGCATCAG CCTGCCGCTG
CTGTATTCGA TGCCCAAGCG CGAACTGGCG CCGACCGAGG ACCAGGCCGC GGTGCTCACC
GCGATCAAGG CGCCGCAGCA CGCCAATCTC GACTACGTCG AACTGTTCGC GCGCAAGCTC
GACCAGGTCT ACACCAGCAT CCCGGAAACC GTGGGCACCT GGATCATCAA CGGCACCGAC
GGACCGGCGG CGAGCTTCGG CGGGATCAAC CTGGCGGCCT GGGACAAGCG CGAGCGCGAC
GCCTCGGCGA TCCAGTCCGA GCTGCAAGGC AAGGTCGGCG ACGTCGAGGG CAGCAGTATC
TTCGCCTTCC AGCTGGCCGC CCTGCCCGGC TCCACCGGCG GCCTGCCGGT ACAACTGGTG
CTGCGCAGCC CGCAGGACTA CCCGGTGCTC TACCGGACCA TGGAAGAGAT CAAGCAGAAG
GCCCGGCAGA GCGGCCTGTT CGTGGTGGTC GACAGCGACC TGGACTACAA CAACCCGGTG
GTGCAGATCC GTATCGACCG GGCCAAGGCC AACAGCCTGG GCATCCGCAT GCAGGACATC
GGCGAGTCGC TGGCGGTGCT GGTGGGCGAG AACTACATCA ACCGCTTCGG CATGGAAGGC
CGCTCCTACG ACGTGATCCC GCAGAGCCTG CGCGACCAGC GCTTCACCCC GCAGGCGCTG
GCCCGGCAGT TCGTGCGCAC CCAGGACGGC AATCTGGTGC CGCTGTCGAC GGTGGTACGG
GTGGAACTCA AGGTCGAGCC GAACAAGCTG ATCCAGTTCG ACCAGCAGAA CGCCGCGACC
CTCCAGGCGA TTCCCGCGCC CGGCGTCTCC ATGGGCCAGG CGGTGGCCTT CCTCGACGAG
GTGGCGCGCG GCCTGCCGGC CGGCTTCAGC CACGACTGGC AATCCGACTC GCGGCAGTAC
ACCCAGGAAG GCAATACCCT GGCCTTCGCC TTCCTCGCCG CGCTGGTGGT GATCTACCTG
GTGCTCGCCG CGCAGTACGA GAGCCTGGCC GACCCGCTGA TCATCCTGAT CACCGTGCCG
CTGTCGATCT GCGGCGCCCT GCTGCCGCTG GCGCTGGGCT ACGCGACGAT GAACATCTAT
ACGCAGATCG GCCTGGTCAC CCTGATCGGC CTGATCAGCA AGCACGGCAT CCTCATGGTC
GAGTTCGCCA ACGAACTGCA GGTCCACGAG CGCCTCGACC GCCGCGCAGC GATCCTGCGC
GCCGCGCAGA TCCGCCTGCG ACCGGTGCTG ATGACCACCG CGGCGATGGT CTTCGGCCTG
GTGCCACTGC TCTTCGCCAG CGGCGCAGGC GCCGCCAGCC GCTTCGGCCT GGGCGTGGTG
ATCGTCTGCG GGATGCTGGT CGGCACCCTC TTCACCCTGT TCGTGCTGCC CACCGTCTAC
ACCCTGCTGG CGCGCAACCA CGCGGAAGTC GACCAGAGCC CGCGCAACCG CCAACTGGCC
GAGGCCGACC TCCTGGTGAA CAAGACATGA
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| Protein sequence | MTFTDLFVRR PVLALVVSTL ILLLGLFSLG KLPIRQYPLL ESSTITVTTE YPGASADLMQ
GFVTQPIAQA VSSVEGIDYL SSTSVQGRSV VTIRMLLNRD STQAMTETMA KVNSVRYKLP
ERAYDSVIER SSGETTAVAY VGFSSKTLPI PALTDYLSRV VEPMFSSIDG VAKVQTFGGQ
RLAMRLWLDA DRLAGRGLTA SDVAEAIRRN NYQAAPGMVK GQYVLSNVRV NTDLTNVDDF
REMVIRNDGN GLVRLRDVGT VELGAAATET SALMDGEPAV HLGLFPTPTG NPLVIVDGIR
KLLPEIQKTL PPDVRVDLAY ETSRFIQASI DEVVRTLVEA LVIVVLVIYL CLGSLRSVLI
PVATIPLSML GAAALMLAFG FSVNLLTLLA MVLAIGLVVD DAIVVVENVH RHIEEGKSPV
AAALIGAREV AGPVIAMTIT LAAVYTPIGL MGGLTGALFR EFALTLAGAV IVSGVVALTL
SPVMSSLLLQ AHQNEGRMGR AAEWFFGGLT RRYGQVLEFS LGHRWLTGGL ALLVCISLPL
LYSMPKRELA PTEDQAAVLT AIKAPQHANL DYVELFARKL DQVYTSIPET VGTWIINGTD
GPAASFGGIN LAAWDKRERD ASAIQSELQG KVGDVEGSSI FAFQLAALPG STGGLPVQLV
LRSPQDYPVL YRTMEEIKQK ARQSGLFVVV DSDLDYNNPV VQIRIDRAKA NSLGIRMQDI
GESLAVLVGE NYINRFGMEG RSYDVIPQSL RDQRFTPQAL ARQFVRTQDG NLVPLSTVVR
VELKVEPNKL IQFDQQNAAT LQAIPAPGVS MGQAVAFLDE VARGLPAGFS HDWQSDSRQY
TQEGNTLAFA FLAALVVIYL VLAAQYESLA DPLIILITVP LSICGALLPL ALGYATMNIY
TQIGLVTLIG LISKHGILMV EFANELQVHE RLDRRAAILR AAQIRLRPVL MTTAAMVFGL
VPLLFASGAG AASRFGLGVV IVCGMLVGTL FTLFVLPTVY TLLARNHAEV DQSPRNRQLA
EADLLVNKT
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