Gene PSPA7_0861 details

Gene Information

• Locus tag: PSPA7_0861
• Symbol: rpsD
• ID: 5354550
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 844752
• End bp: 845372
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640809915
• Product: 30S ribosomal protein S4
• Protein accession: YP_001346247
• Protein GI: 152986119
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCGTT ACATTGGTCC CAAGTGCAAA CTGTCTCGCC GTGAAGGCAC CGACCTGTTC 
CTGAAGAGCG GCGCCCGCGC CCTCGACTCG AAGTGCAAGG CTGAAAACGT TCCCGGCCAG 
CATGGCCAGC GTCGTGGCCG TCTGTCCGAC TACGGTCTGC AGCTGCGTGA GAAGCAGAAG 
GTCCGCCGCA TCTACGGCGT ACTGGAGCGT CAGTTCCGTG GCTACTACCA GGAAGCCTCC 
CGTCGCAAGG GTTCCACCGG TGAGAACCTG CTGCAACTGC TCGAGTGCCG TCTGGACAAC 
GTCGTATACC GCATGGGCTT TGGTTCCACT CGCGCCGAAT CGCGCCAGCT GGTGTCCCAC 
AAGGCCATCA CCGTCAACGG TCAGACCGTC AACATCCCTT CCTACCAAGT GAAGGCCGGT 
GACGTCGTAG CTATTCGCGA GAAGTCGAGG AATCAGCTGC GTATCGCTCA GGCTCTGGAA 
CTCTGTGGCC AGCGCGGTCG TGTCGAGTGG GTCGAAGTCG ACCTCGACAA GAAGACTGGT 
ACCTTCAAGA GTGTTCCGGC TCGCAGCGAC CTGTCCGCTG ATATCAACGA AAACCTGATT 
GTCGAGCTCT ACTCCAAGTA A 

 

Protein sequence

MARYIGPKCK LSRREGTDLF LKSGARALDS KCKAENVPGQ HGQRRGRLSD YGLQLREKQK 
VRRIYGVLER QFRGYYQEAS RRKGSTGENL LQLLECRLDN VVYRMGFGST RAESRQLVSH 
KAITVNGQTV NIPSYQVKAG DVVAIREKSR NQLRIAQALE LCGQRGRVEW VEVDLDKKTG 
TFKSVPARSD LSADINENLI VELYSK