Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0843 |
Symbol | rpsC |
ID | 5358915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 836589 |
End bp | 837275 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640809897 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_001346229 |
Protein GI | 152987607 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.401464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCAGA AAGTACATCC CAATGGCATT CGCCTGGGTA TCGTCAAGGA GCACACCTCC GTTTGGTACG CAGACCGCAA GAACTATGCG GATTACCTGT TTGCCGACCT GAAGGTGCGT GAGTACCTCC AAGACAAACT AAAAAGCGCG TCCGTAAGCC GTATCGATAT CCATCGTCCG GCTCAAACCG CACGTATCAC CATCCACACC GCTCGTCCCG GCATCGTGAT CGGCAAGAAA GGTGAAGATG TTGAGAAGCT GCGCCAGGAC CTGACCAAGC AAATGGGTGT GCCCGTGCAC ATCAACATCG AGGAAATCCG CAAGCCGGAA CTCGATGCCA TGCTGGTTGC GCAGAGCGTA GCCCAGCAGC TGGAGCGTCG CGTAATGTTC CGTCGCGCCA TGAAGCGCGC CGTACAGAAC GCCATGCGCA TTGGTGCCAA GGGCATCAAG ATTCAGGTCA GCGGTCGTCT GGGTGGGGCT GAAATCGCCC GTACCGAATG GTATCGCGAA GGTCGTGTGC CCCTGCACAC CCTGCGCGCC GATATCGACT ATGCCACCTA CGAAGCGCAC ACCACTTACG GTGTGATCGG TGTCAAGGTT TGGATCTTCA AGGGCGAGGT CATCGGTGGC CGCCAGGAAG AACTGAAGCC TGTTGCACCC GCTCCTCGTA AAAAAGCTGC TAGGTAA
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Protein sequence | MGQKVHPNGI RLGIVKEHTS VWYADRKNYA DYLFADLKVR EYLQDKLKSA SVSRIDIHRP AQTARITIHT ARPGIVIGKK GEDVEKLRQD LTKQMGVPVH INIEEIRKPE LDAMLVAQSV AQQLERRVMF RRAMKRAVQN AMRIGAKGIK IQVSGRLGGA EIARTEWYRE GRVPLHTLRA DIDYATYEAH TTYGVIGVKV WIFKGEVIGG RQEELKPVAP APRKKAAR
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