Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0785 |
Symbol | |
ID | 5356565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 781659 |
End bp | 785324 |
Gene Length | 3666 bp |
Protein Length | 1221 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640809839 |
Product | carbohydrate-binding family V/XII protein |
Protein accession | YP_001346180 |
Protein GI | 152985256 |
COG category | [S] Function unknown |
COG ID | [COG4733] Phage-related protein, tail component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGA CCATCACGGG CCACAAGGGT GGCAGCAAGA AGCCGCGCCA GCCGGTGGAG ATGCCGGACT CGGTGCGCTC GATCGCGCGG GCGAAGATTC TCCTGGCACT GGGCGAAGGC GAGTTCGACG GTGGCGTCGA CGGCCGTTCG ATCTACCTGG ACGATACGCC GCTGCTGGCG GCGGACGGCT CGGTGAACTT CCCCGGAGTG ACCTGGGAGT TCCGTCCGGG CTCGGTGGAC CAGGAGCACA TTGCCGGTGT GCCCGCCGTG GAAAACGAAC TGGCGGTCGG CGTCGAGCTC AAGAGTGACG CGCCCTGGGT CCGCGCGGTG AGCAACACCC AGCTCTCGGC GGTGCGCCTG CGCCTGTCCT GGCCGGCTAT CCAGCGCCAG CAGGAAAACG GTGACGTGGT CGGCTACCGA ATCGACTATG CGATCGACAT CGCCGTCGAC GGCGGTGCCT GGCAGGAAGC GCTGAAGGCT TCGCTGGACG ACAAGTCCAC CAGCCGCTAC GAGCGCTCCC ACCGTGTCGA TCTGCCGGAG GCGCGGAGCG GCTGGCAGGT GCGCGTGCGC CGCCTGACGC CGAACCAGAA CAACAACCGC ATCGCCGACA CCATGCGGGT CGAGGCGATC ACCGAGGTGA TCGACGCCAA GCTGCGCTAC CCGAACACCG CGCTGCTGTT CGTCGAGTTC GATGCCAGCC AGTTCCAGAG CATTCCGCAG ATATCGGTGG AAGCGCGCGG CCGGCGGGTG CGGGTGCCGA GCAACTACGA TCCGCAGACC CGTAGCTACA GCGGCACCTG GGACGGCTCG TTCAAGTCGG CCTGGACCAG CAACCCGGCC TGGCACTGGT ACGACATCGT GTTGCACAAG CGCTTCGGCC TCGGTCGGCG GATCGACGCG AGCATGGTCG ACAAGTGGTC GCTGTACCGC ATCGCCCAGT ACTGCGACCA GTCGGTACCC GACGGCAAGG GCGGCCAGGA GCCGCGCTTC AGCTGCAACC TGTACCTGCA GAGTCGCGCC GAAGCCTGGA CCGTGCTGCG CGACCTGGCA GCGATCTTCC GCGGCATGTC CTACTGGTCC GGCGCGGAAA TGGTGGCGGT GGCCGACATG CCGGAGGACG AGGCCTACAC CTTCTCGCCG TCGAACACCG TGCGCGGCGA CGACGGCAGC CACTTCAACT ACAGCAGCAG CCGCCAGCGC GACCGTCACA CCCTGGCCCT GGTCAACTAC GACAATCCGG GCAACGGCTA CCAGAGCCAG CCGGTGGCGG TGAACAATGA CCGCGCGCAG CGCCGCTACG GCATCAGTCA ATTGGAGATC ACCGCGATCG GCTGCACCTC CGAGGGCGAG GCGCAGCGGC GTGGCCAGTG GGCGCTGCTG ACCGAGGAGC TGGAGCAGGA CGCGGTGACC TTCCGTACCG GCATGGATGG CCGCGGGCTG GCGCCGGGGA AGATCATCGC CGTAGCCGAC CCGGTCAAGT CCGGTAAGCA GATTGGCGGA CGCCTGAGCG CGGTGGATGG CCGCGCGCTG ACCCTCGACC GCGACGTCGA GGCGCGGCCC GGCGATCGCC TGCTGGTCAA CCTGCCGAAC GGCAAGGCCG AGGCGCGCAC CGTCCAGTCG GTGGTCGGCC GTGTGCTGAG CGTGACCGCC GCCTATTCGG AGACGCCTCG GCCCCAGGGG CAGTGGGCGC TGCAGAGCAA CAGCCTGACC ACCCAGCGCT TCCGCATCAT GAGCATCACC CGGCCGGAGG ACAATCTCTT CGAGATCACC GCGTTGCAGC ACAACGCGAG CAAGTTCGAC GCCATCGACA ACGGTGCGCG CATCGAGGCA CCGCCGGTCA CCAGCATTCC GCCGGGTGTG CAGGCGCCGC CGCAGAACGT GCGGATCAAG GCTTTCACCA AGGTCGACCA GGGGTTGGCG GTGACCAGCC TGTCGGCTTC CTGGGACGCC GCGCCGAACG CGGTGGCCTA CGAGGCCGAA TGGCGCAAGG ACTCGGGCAA CTGGGTGCGG GTGCCGCGAA CCTCGGCGCT CGGTTTCGAC GTGCCGGGCA TCTATGCCGG TCGCTACCTG GTGCGGGTGC GCGCGCTGAA CGTGATGGAG GTCGGCTCGG TCTACGCCAG CAGCGTGGAA ACCGCTCTCG AGGGCAAGAC CACGCCGCCG CCGGCGCTGG CCTACCTGCG CTGCGTGGCC GGTCCCTGGC GCATCGGCCT GGAGTGGGGG TTCCCGGCCA GCGGCGCGGC GGACACCGCC TACACCGAGA TCCAGCAGTC CGCCACGCCC GGCGGCAGTG AGGAGACCGC ACGGGCGCTG GGCCTGTTCG CCTACCCAGG CAATACCCAC CTGGTATCGC CGATACCGGC CGGCGAACGG CTGGCGTTCC GCGGTCGCTT GATCGACCGT AGCGGCAACG TCGGCGCCTG GTCGAACTGG GTCACCGGCA CCAGCTCCAG TGACGCCAGC GAATACAACC AGTTGATCAC CCAGGAGTAC GTCGAGTCGG CGCTGGGCCA GCAGTTCTTC TCCGATATCG AGCGGATGCA GGTGGATATC GGCGGCTTGC AGAAGCAGGT CGGCGACCTC GCCGACGTTC TGCTGTACGA CCCGGCCAAG GTCTACGCGA AGAACGACAT GGTGCGACAG GGGCAGCGGC TGTACCAGGC CCTGAAGGCT GTGCCGGCGA AGACGGCGCC GCCGAACGCG GCCTACTGGT CCGATATCGG CCAGTCGCTG GAAACCGCCA ACGGGCTGGC GCAGCAGGTG GCGAGCCATA CCGCTGAAAT CAGCGAACTC GACGGCAGCC TTACCGCCCA GGCATCGCGC CTTGGCGTAT TGCAGGCGGC GACCCGTGAC GACGCGGATG ACGGCAATGG CGCCATGGCC GATGCCCTGC GCGGCTGGAA GACCGTTGCC CGGGCAGCCC AGGAGGAAAC CGTACGGGCC ACCGAAAACG AGGCCCAGGC CACTCGCACG ACGCTACTGG AGGCGCGCAC CGCCGATGCC GAAGGGCGAA TCGCCACGGT GGAACGGGTC GCGACCAGCG ATCGCCAGGC CACCGCGCAA CGTCTGGACA AGCTCTCGGC CTCTATCGGT GGCACCGCAG CCAGTCTGCA GAGCGAACAG ACCGCCCGCG CCAACGCCGA CAGCGCCCTC GCACAGCGGA TCGACACCGT GCAGGCGCGC ACCGACACCA ATAGCGCGGC GATCCAGACC ACCTCCCAGG CGGTCGCCTC GCTGGATGGC AACGTCAAGG CGATGTACAG CGTGAAGCTC CAGGCGCATG CCAACGGGCA GAAGTATGCG GCGGGGTGGC AGCTGGGGTT CGACAGTGGA ACCAGTGTGT CGACCATGGC GTTTCAGGCG GATCGGTTTA TCTTTTTTGA TAGTTCGAGT GGGGCTGTTG CTGCTCCGGT TTCGATCGTC GGTGGGAAGA TATTCATCAA TAGCGCGATC ATCAAAGATG GCTCAATAAC CAGCGCAAAA ATAGAAGATT CGCTTCAGTC AGAAAACTAT GAATCCGGCA CTCGGGGGTG GCGTATTGAT AAGTCTGGGA GCTTTGAGCT TAATGGTGAG GAAACTGGTC TCCGTAGAGT TTTACGCCCA AATTATGATC GATACTACGA TACGCAGAGC GGAATCTTGG TAATTGAAAT CGGAGAGCTG GCATGA
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Protein sequence | MNKTITGHKG GSKKPRQPVE MPDSVRSIAR AKILLALGEG EFDGGVDGRS IYLDDTPLLA ADGSVNFPGV TWEFRPGSVD QEHIAGVPAV ENELAVGVEL KSDAPWVRAV SNTQLSAVRL RLSWPAIQRQ QENGDVVGYR IDYAIDIAVD GGAWQEALKA SLDDKSTSRY ERSHRVDLPE ARSGWQVRVR RLTPNQNNNR IADTMRVEAI TEVIDAKLRY PNTALLFVEF DASQFQSIPQ ISVEARGRRV RVPSNYDPQT RSYSGTWDGS FKSAWTSNPA WHWYDIVLHK RFGLGRRIDA SMVDKWSLYR IAQYCDQSVP DGKGGQEPRF SCNLYLQSRA EAWTVLRDLA AIFRGMSYWS GAEMVAVADM PEDEAYTFSP SNTVRGDDGS HFNYSSSRQR DRHTLALVNY DNPGNGYQSQ PVAVNNDRAQ RRYGISQLEI TAIGCTSEGE AQRRGQWALL TEELEQDAVT FRTGMDGRGL APGKIIAVAD PVKSGKQIGG RLSAVDGRAL TLDRDVEARP GDRLLVNLPN GKAEARTVQS VVGRVLSVTA AYSETPRPQG QWALQSNSLT TQRFRIMSIT RPEDNLFEIT ALQHNASKFD AIDNGARIEA PPVTSIPPGV QAPPQNVRIK AFTKVDQGLA VTSLSASWDA APNAVAYEAE WRKDSGNWVR VPRTSALGFD VPGIYAGRYL VRVRALNVME VGSVYASSVE TALEGKTTPP PALAYLRCVA GPWRIGLEWG FPASGAADTA YTEIQQSATP GGSEETARAL GLFAYPGNTH LVSPIPAGER LAFRGRLIDR SGNVGAWSNW VTGTSSSDAS EYNQLITQEY VESALGQQFF SDIERMQVDI GGLQKQVGDL ADVLLYDPAK VYAKNDMVRQ GQRLYQALKA VPAKTAPPNA AYWSDIGQSL ETANGLAQQV ASHTAEISEL DGSLTAQASR LGVLQAATRD DADDGNGAMA DALRGWKTVA RAAQEETVRA TENEAQATRT TLLEARTADA EGRIATVERV ATSDRQATAQ RLDKLSASIG GTAASLQSEQ TARANADSAL AQRIDTVQAR TDTNSAAIQT TSQAVASLDG NVKAMYSVKL QAHANGQKYA AGWQLGFDSG TSVSTMAFQA DRFIFFDSSS GAVAAPVSIV GGKIFINSAI IKDGSITSAK IEDSLQSENY ESGTRGWRID KSGSFELNGE ETGLRRVLRP NYDRYYDTQS GILVIEIGEL A
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