Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0751 |
Symbol | rpe |
ID | 5357547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 756818 |
End bp | 757492 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640809805 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_001346146 |
Protein GI | 152985747 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCCT TCGCCATCGC TCCGTCGATC CTTTCCGCCG ATTTCGCCCG CCTGGGCGAG GACGTGGACA AGGTGCTCGC CGCCGGTGCC GACATCGTTC ACTTCGACGT GATGGACAAC CACTACGTGC CGAACCTGAC CATCGGTCCG ATGGTCTGCT CGGCGCTGCG CAAGTACGGC GTGAGCGCGC CGATCGACGT GCACCTGATG GTCTCCCCGG TGGATCGCAT CATCGGCGAC TTCATCGAAG CTGGCGCCAC CTACATCACC TTCCATCCGG AAGCCTCCCA GCACATCGAC CGCTCCCTGC AACTGATCCG CGACGGCGGC TGCAAGGCCG GCCTGGTATT CAACCCGGCC ACTCCGCTGG ACGTGCTGAA GTACGTGATG GACAAGGTCG ACATGGTCCT GCTGATGAGC GTCAATCCCG GCTTCGGCGG GCAGAAGTTC ATCCCCGGTA CCCTCGACAA GTTGCGTGAG GCACGCGCCC TGATCGATGC CTCCGGTCGC GAGATTCGCC TGGAGATCGA TGGCGGCGTC AACGTCAAGA ACATCCGTGA GATCGCCGCG GCGGGTGCCG ATACCTTCGT CGCCGGCTCG GCCATCTTCA ATGCCCCGGA CTACGCCGAG GTCATCCGCG CCATGCATGC CGAACTGGCC CAGGCGCACC CGTAA
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Protein sequence | MQPFAIAPSI LSADFARLGE DVDKVLAAGA DIVHFDVMDN HYVPNLTIGP MVCSALRKYG VSAPIDVHLM VSPVDRIIGD FIEAGATYIT FHPEASQHID RSLQLIRDGG CKAGLVFNPA TPLDVLKYVM DKVDMVLLMS VNPGFGGQKF IPGTLDKLRE ARALIDASGR EIRLEIDGGV NVKNIREIAA AGADTFVAGS AIFNAPDYAE VIRAMHAELA QAHP
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