Gene PSPA7_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_0549 
SymbolgcdH 
ID5359028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp567602 
End bp568783 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content66% 
IMG OID640809603 
Productglutaryl-CoA dehydrogenase 
Protein accessionYP_001345944 
Protein GI152986723 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCA AAGCTAGCTT CAACTGGGAA GATCCCCTGC TGCTGGACCA GCAGCTCACC 
GAAGAAGAGC GCATGGTTCG CGACAGCGCC CAGCAGTTCG CCCAGGCCAA GCTGGCCCCG
CGCGTGCTCG AAGCCTTCCG CCACGAACAG ACCGACCCGA AGATCTTCCG CGAGATGGGC
GAGACCGGCC TGCTCGGCGC GACCATTCCC GAAGCCTATG GCGGCAGCGG CCTCAACTAC
GTCTGCTATG GCCTGATCGC TCGCGAAGTC GAGCGCGTCG ACTCCGGCTA TCGCTCGATG
ATGAGCGTGC AGTCCTCGCT GGTGATGGTG CCGATCCATG AATTCGGCAA CGAAGCCACC
CGGCAGAAGT ACCTGCCCAA GCTGGCCAGC GGCGAGTACA TCGGCTGCTT CGGCCTGACC
GAGCCGAACC ACGGTTCCGA CCCGGGCTCG ATGGTCACCC GGGCGAAGAA GGTCGACGGC
GGCTATCGCC TGAGCGGCAG CAAGATGTGG ATCACCAACA GCCCGATCGC CGACGTCTTC
GTGGTCTGGG CCAAGGACGA CGAAGGGCAG ATCCGCGGCT TCGTCCTCGA GAAGGGCTGG
GAAGGCCTGA GCGCCCCGGC GATCCACGGC AAGGTCGGCC TGCGCGCCTC GATCACCGGC
GAGATCGTGA TGGACAACGT GTTCGTTCCG GAAGAGAACG CCTTCCCCGA AGTACGCGGC
CTGCGCGGTC CGTTCACCTG CCTGAACTCG GCGCGCTACG GCATTTCGTG GGGCGCCCTG
GGCGCCGCCG AGTTCTGCTG GCACACCGCC CGCCAGTACG TGCTCGACCG CCAGCAGTTC
GGCCGCCCGC TGGCCGCCAA CCAACTGATC CAGAAGAAGC TGGCCGACAT GCAGACCGAG
ATCACCCTGG CCCTGCAAGG CTGCCTGCGC CTGGGGCGGA TGAAGGACGA AGGCACCGCG
GCGGTGGAAA TCACCTCGAT CATGAAGCGC AACAGCTGCG GCAAGGCCCT CGACATCGCC
CGCCTGGCCC GCGACATGCT GGGCGGCAAC GGCATCTCCG ACGAGTTCGG CATCGCCCGC
CACCTGGTCA ACCTGGAGGT GGTGAACACC TACGAGGGTA CCCACGATGT CCACGCGCTG
ATCCTCGGCC GCGCGCAGAC CGGCATCCAG GCGTTCTTCT GA
 
Protein sequence
MATKASFNWE DPLLLDQQLT EEERMVRDSA QQFAQAKLAP RVLEAFRHEQ TDPKIFREMG 
ETGLLGATIP EAYGGSGLNY VCYGLIAREV ERVDSGYRSM MSVQSSLVMV PIHEFGNEAT
RQKYLPKLAS GEYIGCFGLT EPNHGSDPGS MVTRAKKVDG GYRLSGSKMW ITNSPIADVF
VVWAKDDEGQ IRGFVLEKGW EGLSAPAIHG KVGLRASITG EIVMDNVFVP EENAFPEVRG
LRGPFTCLNS ARYGISWGAL GAAEFCWHTA RQYVLDRQQF GRPLAANQLI QKKLADMQTE
ITLALQGCLR LGRMKDEGTA AVEITSIMKR NSCGKALDIA RLARDMLGGN GISDEFGIAR
HLVNLEVVNT YEGTHDVHAL ILGRAQTGIQ AFF