| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0419 |
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| Symbol | |
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| ID | 5358589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 427435 |
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| End bp | 429378 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640809473 |
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| Product | hypothetical protein |
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| Protein accession | YP_001345814 |
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| Protein GI | 152986662 |
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| COG category | [N] Cell motility |
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| COG ID | [COG5571] Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCAAAC CATTAGCTGT CGCTGTAAGC CTGGGATGTG CTGCGCTGTC ATCGGGCGCC
AACGCCTACC AGTATGGGGA GTATGCCGGG GAGACCCTGG AGCGCCTGAT CACCGACTAT
CCCGGCCGCT ACCGCGGCAC CGCCAGCTTC GCCGGCGCCA CCGAGCTGAT GCAGTCGCGC
CTGGGCTTCG GCTACCAGAC CAGCCGCCAG GACTTCACCT GGGCCGGCAA CCGCAGTTCG
CAGAACGTCA TCGCCTCGGC GCCCGGCAGC AGCGGCAAGG TCCTGGTGCT CGGCGCGCAC
TACGACACCT ACTACGGCCG CCCGACCCTG CAGGGCCTGG ACGATAACGC CTCGGGCGCC
GCGGTGCTCA CCGAGATCGC CCGCAACCTC GGCGGCATCG CCCTGGAGAA CGGCCTGGAG
GTGGTCGGTT TCGGCGCCGA GGAGGAAGGC CTGCGTGGCT CGCGCGCCTA CGTCGAGTCC
CTCGACGCCA GCCAGCGCGC CAACCTGCTG GGGATGATCA ACCTCGACAG CCTGGTCACC
GGCGACAGGA TGTACGCCCA TGCCGGCTCC AACAGCGTGG CCAACCCGGC CCTCGGCGCC
TACCGCGAAC AGATCCTGCG CATCGCCCGC GAGCTGGACA TCCCGTTGTT CACCAACCCC
GGCCTGAACG CCGAATACCC GGCGGGTACC GGCTGCTGCA GCGACGGCGA AAGCTTCAAC
GGGATGGACA TCCCGGTGTT GTTCATCGAG GCGACCAACT GGGAACTGGG CGACCTGGAC
GGCTACGAGC AGACCGACAA CCCGGCGATT CCCGGCGGCT CCACCTGGCA CGACCCGGCC
GAGGACAACA AGGAAGTGCT GACCGGCGCC TTCGGCCAGG AACGCATCGA CCAGCGCATG
CGCGACTTCT CCCGCCTGCT GACACGCCTG GTGCTGGAGC TGACCAACGC CGACCTGCTC
GCCTCCACCG CCTCCGGCGG CGCCCTGGCA CGGCAGATGG AAGACCAACT GCAACGCCAG
CACCAGGCGC TGACCCGCCT GCACGACCGG CGCTGGCTGA CGCTGCTCGG CAGCAGCCGA
CCGGTGGGCA GCTTCGACGG CGAAGTGGGC GCGGAGGGCG AGGTCTCGCC GGACAGCGGC
TTCGACATGC CCGGCGATCC CGAGTCCAGG CGCGCCGGCG TGCACCTGCT CGGCGACTAC
CGCTACAGCG AGGCCCTGAC CCTCGGCGCC AGCCTGGCCT TCCAGCGCAG CCGCGACAAG
CTGGACCATG GCGGGCGCAT CGAGGGCGAC ACCTGGCAGC TCGGCCTGTT CGGCCTGTAC
CACGACGGCG GTCCGCAATG GCTGGCCGGC GAGCTGAACC TCGGGCATAC CCGCTACGAC
AGCAAGCGCC CGGTCTACCT GCAGGCCGCC GGGGGCCCGG TGCTACTCGA CCAGCGCCTC
TCCGGCGACA CCTCGGCCTG GTCCTGGGGC GCGCGGCTGG AAGGCGGCTA TGACTTCAGC
TTCGGCGAAC TGCGGAGCGG GCCGCTGGCC GGCCTCGACT ACATGCGCTA CCGCATCGAC
GACTTCCGCG AGGACGAGGC CCTGCGCACC GCGCTCGGCT ATGAGAAGCA GGACTACGAC
TCGCTGGAGG CCAGCCTCGG CTGGCGCCTG CGCGGCGAGC TGGCGCTGGG CGCGAGGATG
CGCCTGCAAC CCTACGCCAG CCTGCGCTGG GTACGCGAGC TGGCCGACGG TCGGCTGGAC
GATATCGATC TGACCAGCCG CGGCGACGGG CGGATCCGGG TCGCCGACAT GGGCGACGTG
GACAAGGACT TCGGCCGCGC CCAGTTCGGC GCGCAGTTGG CGATCACCGA GCAGCTCGGG
ATCTTCGCCG AAGCCAACAG CCGCTTCGCC CACAGCGAAG GCAACCAGGC GGGCTATTCG
CTCGGGGTGA ACTGGCAGTT CTGA
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| Protein sequence | MFKPLAVAVS LGCAALSSGA NAYQYGEYAG ETLERLITDY PGRYRGTASF AGATELMQSR
LGFGYQTSRQ DFTWAGNRSS QNVIASAPGS SGKVLVLGAH YDTYYGRPTL QGLDDNASGA
AVLTEIARNL GGIALENGLE VVGFGAEEEG LRGSRAYVES LDASQRANLL GMINLDSLVT
GDRMYAHAGS NSVANPALGA YREQILRIAR ELDIPLFTNP GLNAEYPAGT GCCSDGESFN
GMDIPVLFIE ATNWELGDLD GYEQTDNPAI PGGSTWHDPA EDNKEVLTGA FGQERIDQRM
RDFSRLLTRL VLELTNADLL ASTASGGALA RQMEDQLQRQ HQALTRLHDR RWLTLLGSSR
PVGSFDGEVG AEGEVSPDSG FDMPGDPESR RAGVHLLGDY RYSEALTLGA SLAFQRSRDK
LDHGGRIEGD TWQLGLFGLY HDGGPQWLAG ELNLGHTRYD SKRPVYLQAA GGPVLLDQRL
SGDTSAWSWG ARLEGGYDFS FGELRSGPLA GLDYMRYRID DFREDEALRT ALGYEKQDYD
SLEASLGWRL RGELALGARM RLQPYASLRW VRELADGRLD DIDLTSRGDG RIRVADMGDV
DKDFGRAQFG AQLAITEQLG IFAEANSRFA HSEGNQAGYS LGVNWQF
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