| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0344 |
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| Symbol | gabT |
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| ID | 5359852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 354631 |
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| End bp | 355911 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640809398 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001345739 |
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| Protein GI | 152986520 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA CCAACGAATC CCTGCTGAAG CGTCGCCAGG CCGCGGTACC CCGCGGCGTG
GGCCAGATCC ACCCGGTCGT CGCCGAGCGC GCCGAGAACT CCACCGTCTG GGACGTGGAA
GGCCGCGAAT ACATCGACTT CGCCGGCGGC ATCGCCGTAC TGAACACCGG CCACCTGCAT
CCGAAGGTGA TCGCCGCGGT CCAGGAACAG CTGGGCAAGC TGTCCCACAC CTGCTTCCAG
GTGCTGGCCT ACGAGCCCTA CATCGAGCTG GCCGAGGAAA TCGCCAAGCG CGTGCCGGGC
GACTTCCCGA AGAAGACCCT GCTGGTGACT TCCGGCTCCG AGGCCGTCGA GAACGCCGTC
AAGATCGCCC GCGCCGCCAC CGGTCGCGCT GGCGTGATCG CCTTCACCGG CGCCTACCAC
GGCCGCACCA TGATGACCCT GGGCCTGACC GGCAAGGTGG TCCCGTACTC CGCCGGCATG
GGCCTGATGC CGGGCGGCAT CTTCCGCGCC CTGGCGCCCT GCGAGCTGCA CGGCGTGAGC
GAGGACGACT CCATCGCCAG CATCGAGCGC ATCTTCAAGA ACGATGCCCA GCCCCAGGAC
ATCGCCGCGA TCATCATCGA GCCGGTGCAG GGCGAGGGTG GCTTCTACGT CAACTCCAAG
TCCTTCATGC AGCGCCTGCG CGCCCTGTGC GACCAGCACG GGATCCTGCT GATCGCCGAC
GAAGTGCAGA CCGGCGCCGG CCGTACCGGC ACCTTCTTCG CCACCGAGCA ACTGGGCATC
GTTCCTGACC TGACCACCTT CGCCAAGTCG GTCGGCGGCG GCTTCCCGAT CTCCGGCGTG
GCCGGCAAGG CCGAGATCAT GGACGCCATC GCTCCCGGCG GCCTGGGCGG CACCTATGCC
GGCAGCCCGA TCGCCTGCGC CGCGGCCCTG GCCGTGCTGA AGGTGTTCGA GGAAGAGAAG
CTGCTGGAAC GTTCGCAAGC CGTCGGCGAG CGCCTGAAGG CCGGCCTGCG CGAGATCCAG
GCCAAGCACA AGGTGATCGG CGATGTCCGT GGCCTGGGTT CGATGGTGGC CATCGAGCTG
TTCGAGGGCG GCGACACCCA CAAGCCGGCC GCCGAGCTGG TCAGCAAGAT CGTCGTGCGC
GCGCGTGAGA AGGGTCTGAT CCTGCTCTCC TGCGGCACCT ACTACAACGT CATCCGCTTC
CTGATGCCCG TCACCATCCC CGACGCGCAA CTGGAGAAGG GCCTGGCCAT CCTGGCCGAG
TGCTTCGACG AACTCGCTTA A
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| Protein sequence | MSKTNESLLK RRQAAVPRGV GQIHPVVAER AENSTVWDVE GREYIDFAGG IAVLNTGHLH
PKVIAAVQEQ LGKLSHTCFQ VLAYEPYIEL AEEIAKRVPG DFPKKTLLVT SGSEAVENAV
KIARAATGRA GVIAFTGAYH GRTMMTLGLT GKVVPYSAGM GLMPGGIFRA LAPCELHGVS
EDDSIASIER IFKNDAQPQD IAAIIIEPVQ GEGGFYVNSK SFMQRLRALC DQHGILLIAD
EVQTGAGRTG TFFATEQLGI VPDLTTFAKS VGGGFPISGV AGKAEIMDAI APGGLGGTYA
GSPIACAAAL AVLKVFEEEK LLERSQAVGE RLKAGLREIQ AKHKVIGDVR GLGSMVAIEL
FEGGDTHKPA AELVSKIVVR AREKGLILLS CGTYYNVIRF LMPVTIPDAQ LEKGLAILAE
CFDELA
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