Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0331 |
Symbol | |
ID | 5356483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 342916 |
End bp | 344463 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640809385 |
Product | MFS family transporter |
Protein accession | YP_001345727 |
Protein GI | 152987119 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGCTG CCCTTCGCGT CGCGTCCGTC CCAGGTGCCG TCTTGCCAGA GCTCGCCCAC AACCCGCCCG TCGTCCGTAC CGTCCTCGTC GGCCTGATGC TGTCGATCTT CCTCAGCGCC CTCGACCAGA CCATCGTCGC CGTCTCCCTG CCGGCGATCT CCGCCGACTT CGCCGACCTC GACCTGCTGG CCTGGGTGAT CTCCGGCTAC ATGGTGGCGA TGACCGTGTC GATGCCGATC TATGGCAAGC TCGGCGATCT CTACGGGCGG CGCCGACTGA TGCTCTTCGC CATCGCCGTG TTCAGCGCCG CCTCGCTGCT CTGCGGGCTG GCGCAGAGCA TGGGCCAACT GGTGCTGGGA CGGGTGCTGC AGGGGATCGG CGCGGGCGGG TTGATGGCGG TCAGCCAGGC GATCGTCGGC GACATCGTCC CGCCGCGCGA ACGCGGGCGC TACCAGGGCT ACTTCAGCAG CATGTACGCC ATCGCCAGCG TCGCCGGACC GGTGCTCGGC GGCCTGCTCA CCGAATACCT GTCGTGGCGC TGGGTATTCT GGATCAACCT GCCGATCGGC CTGCTCGCGC TGGCCATCTC GCGGCGAACC CTGGTCGGCC TGCCGGTGCC GCGCCGGCAG CCGCTGATCG ACTACCCGGG CATCGCGCTG ATGGTGGTCG GTCTCACCGC CCTGCTGCTG GGCATCACCC AGATCGGCCA GGGCGTGGCC TGGAACGACC CGGCGCTGCT CGGCCTGTTC GCCCTGGCGG CGGTCGTCCT GCTGCTGTTC ATTCTCCAGG AGCGGCGTTT CCGCGAGCCG CTGGTGCCGA TGCAGCTGTT TTGCATCCGC GCCGCCACCC TCAGCTGGCT GGTGGCGTTC TTCGCCAGCT TCCAGGCCAT CTCGCTGACC GTGCTGGTGC CGCTGCGCTA CCAGAGCGTC ACCGGCGCCG GCGCCGACAG CGCCGCGCTG CACCTGCTGC CGCTGGTCAT GGGCCTGCCG CTGGGCGCCT ACTGCTGCGG CCGGCTGACC GCCAGCCTGG GGCGCTACAA GCCATTGATC CTGGGCGGCG CCCTGCTCCT GCCGTGCAGC ATCGCCGGCC TGGCCCTGAC CCCGGCCACG CACCCCTGGC TGTCGGGGCT CTTCATGTTG CTCACCGGGA TCGCCGTCGG CACCCAGTTC CCCACCAGCC TGGTGGCTGC GCAGAATGCC GTGGAACAAC GCCATATCGG TGTGGCCACC AGCAACGCGA CGCTGTTCCG CTCCCTCGGC GGCGCGGTCG GGGTGGCGCT GATGTCGGCG ATCCTGCTGG CCCTGCTCAA GCATCTGCGG ATCGGCGGCG GCATCGACCA GGGGTTCTCC GAAAGCGCCC TGCTGAGCAG CCTGAACGCC GCCAGCGGAC CGGCGCAGAT CATCTTCCAG CACGTCCTCG CGGATGCCTT CAAGGTGCTC TTCCTGATCA ACGCGGCGGT GGCCCTACTT GGCCTGGCGG TGGCCGCGGC GCTGCCCGAC ATGCCCTTGC GCGGTCGCCC GGTGGCGGAG CCGGCGGCCG GGGAGTGA
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Protein sequence | MPAALRVASV PGAVLPELAH NPPVVRTVLV GLMLSIFLSA LDQTIVAVSL PAISADFADL DLLAWVISGY MVAMTVSMPI YGKLGDLYGR RRLMLFAIAV FSAASLLCGL AQSMGQLVLG RVLQGIGAGG LMAVSQAIVG DIVPPRERGR YQGYFSSMYA IASVAGPVLG GLLTEYLSWR WVFWINLPIG LLALAISRRT LVGLPVPRRQ PLIDYPGIAL MVVGLTALLL GITQIGQGVA WNDPALLGLF ALAAVVLLLF ILQERRFREP LVPMQLFCIR AATLSWLVAF FASFQAISLT VLVPLRYQSV TGAGADSAAL HLLPLVMGLP LGAYCCGRLT ASLGRYKPLI LGGALLLPCS IAGLALTPAT HPWLSGLFML LTGIAVGTQF PTSLVAAQNA VEQRHIGVAT SNATLFRSLG GAVGVALMSA ILLALLKHLR IGGGIDQGFS ESALLSSLNA ASGPAQIIFQ HVLADAFKVL FLINAAVALL GLAVAAALPD MPLRGRPVAE PAAGE
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