Gene PSPA7_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_0331 
Symbol 
ID5356483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp342916 
End bp344463 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content70% 
IMG OID640809385 
ProductMFS family transporter 
Protein accessionYP_001345727 
Protein GI152987119 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCTG CCCTTCGCGT CGCGTCCGTC CCAGGTGCCG TCTTGCCAGA GCTCGCCCAC 
AACCCGCCCG TCGTCCGTAC CGTCCTCGTC GGCCTGATGC TGTCGATCTT CCTCAGCGCC
CTCGACCAGA CCATCGTCGC CGTCTCCCTG CCGGCGATCT CCGCCGACTT CGCCGACCTC
GACCTGCTGG CCTGGGTGAT CTCCGGCTAC ATGGTGGCGA TGACCGTGTC GATGCCGATC
TATGGCAAGC TCGGCGATCT CTACGGGCGG CGCCGACTGA TGCTCTTCGC CATCGCCGTG
TTCAGCGCCG CCTCGCTGCT CTGCGGGCTG GCGCAGAGCA TGGGCCAACT GGTGCTGGGA
CGGGTGCTGC AGGGGATCGG CGCGGGCGGG TTGATGGCGG TCAGCCAGGC GATCGTCGGC
GACATCGTCC CGCCGCGCGA ACGCGGGCGC TACCAGGGCT ACTTCAGCAG CATGTACGCC
ATCGCCAGCG TCGCCGGACC GGTGCTCGGC GGCCTGCTCA CCGAATACCT GTCGTGGCGC
TGGGTATTCT GGATCAACCT GCCGATCGGC CTGCTCGCGC TGGCCATCTC GCGGCGAACC
CTGGTCGGCC TGCCGGTGCC GCGCCGGCAG CCGCTGATCG ACTACCCGGG CATCGCGCTG
ATGGTGGTCG GTCTCACCGC CCTGCTGCTG GGCATCACCC AGATCGGCCA GGGCGTGGCC
TGGAACGACC CGGCGCTGCT CGGCCTGTTC GCCCTGGCGG CGGTCGTCCT GCTGCTGTTC
ATTCTCCAGG AGCGGCGTTT CCGCGAGCCG CTGGTGCCGA TGCAGCTGTT TTGCATCCGC
GCCGCCACCC TCAGCTGGCT GGTGGCGTTC TTCGCCAGCT TCCAGGCCAT CTCGCTGACC
GTGCTGGTGC CGCTGCGCTA CCAGAGCGTC ACCGGCGCCG GCGCCGACAG CGCCGCGCTG
CACCTGCTGC CGCTGGTCAT GGGCCTGCCG CTGGGCGCCT ACTGCTGCGG CCGGCTGACC
GCCAGCCTGG GGCGCTACAA GCCATTGATC CTGGGCGGCG CCCTGCTCCT GCCGTGCAGC
ATCGCCGGCC TGGCCCTGAC CCCGGCCACG CACCCCTGGC TGTCGGGGCT CTTCATGTTG
CTCACCGGGA TCGCCGTCGG CACCCAGTTC CCCACCAGCC TGGTGGCTGC GCAGAATGCC
GTGGAACAAC GCCATATCGG TGTGGCCACC AGCAACGCGA CGCTGTTCCG CTCCCTCGGC
GGCGCGGTCG GGGTGGCGCT GATGTCGGCG ATCCTGCTGG CCCTGCTCAA GCATCTGCGG
ATCGGCGGCG GCATCGACCA GGGGTTCTCC GAAAGCGCCC TGCTGAGCAG CCTGAACGCC
GCCAGCGGAC CGGCGCAGAT CATCTTCCAG CACGTCCTCG CGGATGCCTT CAAGGTGCTC
TTCCTGATCA ACGCGGCGGT GGCCCTACTT GGCCTGGCGG TGGCCGCGGC GCTGCCCGAC
ATGCCCTTGC GCGGTCGCCC GGTGGCGGAG CCGGCGGCCG GGGAGTGA
 
Protein sequence
MPAALRVASV PGAVLPELAH NPPVVRTVLV GLMLSIFLSA LDQTIVAVSL PAISADFADL 
DLLAWVISGY MVAMTVSMPI YGKLGDLYGR RRLMLFAIAV FSAASLLCGL AQSMGQLVLG
RVLQGIGAGG LMAVSQAIVG DIVPPRERGR YQGYFSSMYA IASVAGPVLG GLLTEYLSWR
WVFWINLPIG LLALAISRRT LVGLPVPRRQ PLIDYPGIAL MVVGLTALLL GITQIGQGVA
WNDPALLGLF ALAAVVLLLF ILQERRFREP LVPMQLFCIR AATLSWLVAF FASFQAISLT
VLVPLRYQSV TGAGADSAAL HLLPLVMGLP LGAYCCGRLT ASLGRYKPLI LGGALLLPCS
IAGLALTPAT HPWLSGLFML LTGIAVGTQF PTSLVAAQNA VEQRHIGVAT SNATLFRSLG
GAVGVALMSA ILLALLKHLR IGGGIDQGFS ESALLSSLNA ASGPAQIIFQ HVLADAFKVL
FLINAAVALL GLAVAAALPD MPLRGRPVAE PAAGE