| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0296 |
|---|
| Symbol | mdcE |
|---|
| ID | 5354082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 308796 |
|---|
| End bp | 309602 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640809350 |
|---|
| Product | malonate decarboxylase subunit gamma |
|---|
| Protein accession | YP_001345692 |
|---|
| Protein GI | 152988758 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03134] malonate decarboxylase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.526825 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGC CTTCCGCATC CCGTGGTCAG GCCTGGTTCC AGGCGCTGGC CGGAAACCTC
CCGCCGCGCG CCGGCGATCC CGCCTCGCTG CGCGTCGCCG ACCTCGAGCT GGACGGCTAC
CCGGCGCGGG TCCTGGCAGT CGTGCCGGAC GCCGGCAACC CCTTCCCGCG CGCCCGCCAG
GGCGAGGTCG GGCTGCTCGA GGGCTGGGGC CTGGCCGCCG CCGTCGACGA GGCGCTGGAG
GCCGACCGCG AGGCGCCGCG CAAGCGTGCG CTGCTGGCCA TCGTCGACGT GCCGAGCCAG
GCCTACGGCC GCCGCGAGGA GGCCCTGGGT ATCCACCAGG CGCTGGCCGG GGCGGTGGAC
GCCTACGCCC GCGCCCGGCT CGCCGGGCAT CCGCTGATCG GCCTGCTGGT GGGCAAGGCG
ATGTCCGGCG CGTTCCTCGC CCATGGCTAC CAGGCCAATC GCCTGATCGC ACTGCGCGAT
CCGGGGGTGA TGGTCCACGC CATGGGCAAG GCCGCCGCCG CGCGGATCAC CCTGCGCAGC
GTCGAGGAAC TGGAGGCGCT GGCGGCGCAG GTGCCGCCGA TGGCCTACGA CATCGACAGC
TACGCCTCGC TCGGGCTGCT CTGGAAGACC CTGGAGGTAG AGGCCATCGA AGCGCCTACG
ACGAACGATC TGGCGCGGGT ACGCGAATGC CTGGGCGCGG CGCTGCTCGA CATCCTCGCC
GGCCCGCGCG ACCTGGGTGG CCGCCTCGGC GCGGCCAATC GCGAGGCGTC GGCGCGCGTG
CGCCGGTTGC TGCGCGAGCA GTGGTGA
|
|---|
| Protein sequence | MSQPSASRGQ AWFQALAGNL PPRAGDPASL RVADLELDGY PARVLAVVPD AGNPFPRARQ
GEVGLLEGWG LAAAVDEALE ADREAPRKRA LLAIVDVPSQ AYGRREEALG IHQALAGAVD
AYARARLAGH PLIGLLVGKA MSGAFLAHGY QANRLIALRD PGVMVHAMGK AAAARITLRS
VEELEALAAQ VPPMAYDIDS YASLGLLWKT LEVEAIEAPT TNDLARVREC LGAALLDILA
GPRDLGGRLG AANREASARV RRLLREQW
|
|---|
| |