Gene PSPA7_0163 details

Gene Information

• Locus tag: PSPA7_0163
• ID: 5355069
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 180575
• End bp: 182515
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640809217
• Product: hypothetical protein
• Protein accession: YP_001345559
• Protein GI: 152987570
• COG category: [S] Function unknown
• COG ID: [COG3501] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR01646] Rhs element Vgr protein; [TIGR03361] type VI secretion system Vgr family protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.766784
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGATTGA TGCAACTGAC CCGCCTGGTC CAGGTGGATT GCCCGCTGGG GGCGGACGTG 
CTGCTGTTGC AGCGCATGGA GGGCCGCGAG GAACTGGGGC GGCTGTTCGC CTACGAGCTG 
CACCTGGTCT CGGAGAACCC CAACCTGCCG CTGGAACAGT TGCTCGGCAA GCCGATGAGC 
CTCTCGCTGG AGCTGCCCGG CGGCGGCCGG CGCTTCTTCC ACGGCATCGT CGCGCGCTGC 
AGCCAGGTGG CCGGGCACGG CCAGTTCGCC GGCTACCAGG CCACCCTGCG GCCCTGGCCG 
TGGCTGCTGA CGCGGACCTC GGACTGCCGG ATCTTCCAGA ACCAGAGCGT GCCGGAGATC 
ATCAGGCAGG TATTCCGCGA CCTCGGCTTT TCCGATTTCG AGGATGCCCT CACGCGCCCC 
TACCGCGAGT GGGAATACTG CGTGCAGTAC CGCGAGAGCA GCTTCGACTT CGTCAGCCGG 
CTGATGGAAC AGGAGGGCAT CTACTACTGG TTCCGCCATG AGCAGAAGCG CCACATCCTG 
GTGCTCTCCG ACGCCTACGG CGCGCATCGC AGCCCGGGTG GCTACGCCAG CGTGCCGTAC 
TACCCGCCGA CCCTCGGCCA TCGCGAGCGC GACCACTTCT TCGACTGGCA GATGGCACGC 
GAGGTCCAGC CTGGTTCGCT GACCCTCAAC GACTACGACT TCCAGCGCCC CGGCGCGCGC 
CTGGAGGTGC GTTCGAACAT CGCCCGGCCG CACGCGGCGG CCGACTACCC GCTGTACGAC 
TATCCCGGCG AGTACGTGCA GAGCCAGGAC GGCGAGCAGT ACGCGCGCAA CCGCATCGAG 
GCGCTCCAGG CGCAGCACGA GCGCGTGCGC CTGCGCGGCG TGGTGCGCGG CCTCGGCGCC 
GGGCACCTGT TCCGCCTGAG CGGTTATCCG CGCGAAGACC AGAACCGCGA GTACCTGGTG 
GTCGGCGCCG AATACCGGGT GGTCCAGGAG CTCTACGAAA CCGGCAGCGG CGGCGCCGGC 
TCGCAGTTCG AGAGCGAGCT GGACTGCATC GACGCCAGCC AGTCGTTCCG TCTCTTGCCG 
CAGACTCCGG TGCCGGTGGT GCGCGGTCCG CAGACCGCGG TGGTGGTCGG GCCCAAGGGC 
GAGGAGATCT GGACCGACCA GTACGGCCGG GTCAAGGTGC ACTTCCACTG GGATCGCCAC 
GACCAGTCGA ACGAGAACAG CTCCTGCTGG ATCCGCGTGT CCCAGGCCTG GGCCGGGAAG 
AACTGGGGTT CGATGCAGAT CCCGCGGATC GGCCAGGAAG TGATCGTCAG CTTCCTCGAA 
GGCGACCCGG ACCGGCCGAT CATCACCGGG CGGGTCTACA ACGCCGAGCA GACGGTGCCC 
TACGAGCTGC CGGCGAACGC CACCCAGAGC GGGATGAAGA GCCGTTCGAG CAAGGGCGGC 
ACGCCGGCCA ACTTCAACGA GATCCGCATG GAGGACAAGA AGGGCGCCGA GCAGTTGTAC 
ATCCATGCCG AACGCAACCA GGACAACCTG GTGGAGAACG ACGCCTCGCT GATCGTCGGC 
CACGACCGCA ACAAGAGCGT CGGCAACGAC GAACTGGCGC GCATCGGCCA CAACCGCACC 
CGCGCGGTGA AGCTCAACGA CACCCTGCTG GTGGGCGGGG CGAAGAGCGA TAGCGTCAGC 
GGCACCTACC TGATCGAGGC CGGCGCGCAG ATCCGCCTGG TCTGCGGCAA GAGCGTGGTG 
GAGTTCAACG CCGACGGCAC CATCAACATC TCCGGCAGCG CCTTCAACCT CTACGCCAGC 
GGCAACGGCA ACATCGACAC CGGCGGCCGC CTCGACCTCA ATTCCGGCGG CGCCAGCGAG 
GTCGACGCCA ACGGCAAGGG CGTGCAGGGC ACCATCGACG GCCAGGTGCA GGCGATGTTC 
CCGCCGCCGC CGAAGGCCTG A 

 

Protein sequence

MGLMQLTRLV QVDCPLGADV LLLQRMEGRE ELGRLFAYEL HLVSENPNLP LEQLLGKPMS 
LSLELPGGGR RFFHGIVARC SQVAGHGQFA GYQATLRPWP WLLTRTSDCR IFQNQSVPEI 
IRQVFRDLGF SDFEDALTRP YREWEYCVQY RESSFDFVSR LMEQEGIYYW FRHEQKRHIL 
VLSDAYGAHR SPGGYASVPY YPPTLGHRER DHFFDWQMAR EVQPGSLTLN DYDFQRPGAR 
LEVRSNIARP HAAADYPLYD YPGEYVQSQD GEQYARNRIE ALQAQHERVR LRGVVRGLGA 
GHLFRLSGYP REDQNREYLV VGAEYRVVQE LYETGSGGAG SQFESELDCI DASQSFRLLP 
QTPVPVVRGP QTAVVVGPKG EEIWTDQYGR VKVHFHWDRH DQSNENSSCW IRVSQAWAGK 
NWGSMQIPRI GQEVIVSFLE GDPDRPIITG RVYNAEQTVP YELPANATQS GMKSRSSKGG 
TPANFNEIRM EDKKGAEQLY IHAERNQDNL VENDASLIVG HDRNKSVGND ELARIGHNRT 
RAVKLNDTLL VGGAKSDSVS GTYLIEAGAQ IRLVCGKSVV EFNADGTINI SGSAFNLYAS 
GNGNIDTGGR LDLNSGGASE VDANGKGVQG TIDGQVQAMF PPPPKA