| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0162 |
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| Symbol | |
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| ID | 5355481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 177832 |
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| End bp | 180540 |
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| Gene Length | 2709 bp |
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| Protein Length | 902 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640809216 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001345558 |
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| Protein GI | 152989614 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.475088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGA TCAGTCGCGT TGCGCTGTTC GGCAAGCTGA ACAGCCTGGC CTACAAGGCC
ATCGAGGCCG CCACGGTATT CTGCAAGCTG CGCGGCAATC CCTATGTCGA GCTGGTGCAC
TGGTTCCACC AGATCCTCCA GTTGCCGGAC TCGGACCTGC ACCAGATCGT CCGCCAGTCC
GGGATCGACC CGGCGCGCCT GGCCAAGGAC CTGACCGAGG CCCTCGACCG CCTGCCGCGC
GGCTCGACCT CGATCACCGA CCTGTCCTCC CATGTCGAGG AGGCGGTGGA GCGCGGCTGG
GTCTACGGCA GCCTGATGTT CGGCGAGAGC CAGGTGCGCA CCGGCTACCT GGTGATCGGC
ATCCTCAAGA CGCCGAGCCT GCGCCATGCC CTCACCGGGC TGTCGGCGGA ATTCGCCAAG
CTCAAGGTCG AGGCGCTCAC CGAGCGCTTC GACGAGTACG TCGGCGCCTC GCCGGAGAAC
GGCCTGTCGG CCAGCGACGG CTTCAACGCC GGCGCCGCCC CGGGCGAGGC CAGCGGCGCC
ATGGCGCCGA GCGCGATGGG CAGGCAGGAG GCGCTCAAGC GCTTCACCGT GGACCTCACC
GAGCAGGCCC GCAGCGGCAA GCTCGATCCC ATCGTCGGGC GTGACGAGGA GATCCGCCAA
CTGGTGGACA TCCTCATGCG CCGCCGGCAG AACAACCCGA TCCTCACCGG CGAGGCCGGC
GTCGGCAAGA CCGCGGTGGT GGAAGGCTTC GCCCTGCGCA TCGTCGCCGG CGACGTCCCG
CCGGCGCTGA AGGACGTCGA ACTGCGCGCC CTCGACGTCG GCCTGCTGCA GGCCGGGGCG
AGCATGAAGG GCGAGTTCGA GCAGCGCCTG CGCCAGGTGA TCGAGGACGT GCAGAGTTCC
GAGAAGCCGA TCATCCTGTT CATCGACGAA GCCCACACCC TGGTCGGCGC CGGTGGCGCG
GCCGGCACCG GCGACGCCGC CAACCTGCTC AAGCCGGCGC TGGCGCGCGG CACCCTGCGC
ACCGTGGCGG CGACCACCTG GGCCGAGTAC AAGAAGCACA TCGAGAAAGA CCCGGCGCTG
ACCCGGCGCT TCCAGGTGGT GCAGGTGGAC GAGCCGTCCG AGCACAAGGC GATCCTGATG
ATGCGCGGCG TCGCCTCGAC CATGGAGCAG CACCACCAGG TGCAGATCCT CGACGAGGCG
CTGGAGGCGG CGGTCCGGCT GTCGCACCGC TACATCCCGG CGCGCCAGCT GCCGGACAAG
TCGGTGAGCC TGCTGGATAC CGCCTGCGCG CGCACCGCCA TCAGCCTGCA CGCGGTGCCG
GCCGAGGTCG ACGACAGCCG CCGGCGCATC GAGGCGCTGG AAACCGAACT GGCGATCATC
CGCCGCGAGA GCGCCATCGG CGTCGCCACC GGCGAACGCC AGCGCAACGC CGAGACCCTG
CTGGCCGAGG AGCGCGAGCG CCTGGCCGGC CTGGAGCGGC GCTGGGCCGA GGAAAAACGC
CTGGTCGACG AACTGCTGGA GACCCGTGCC CGCCTGCGCG CCGCCGCCGA GGCGGTGGAC
GCCGGCGGCA CGCCGCTGGG CGAGGGCGAG GCGCGTCTCG ACGAGGAGCA GCGCCAGGCG
CTGCATGCGC GGCTGGCGGA ACTGCAGGCG CAACTGAGCG CGTTGCAGGG CGAGGAACCG
CTGATCCTGC CGACCGTGGA CTACCAGGCA GTGGCCTCGG TGGTCGCCGA CTGGACCGGG
ATTCCGGTCG GGCGCATGGC GCGCAACGAG ATCGAGACCG TGCTCAATCT CGACAGCCAC
CTGAAGAAAC GCATCATCGG CCAGGACCAC GCGCTGGAGA TGATCGCCAA GCGCATCCAG
ACCTCCCGCG CCGGCCTCGA CAACCCGAGC AAGCCGATCG GCGTGTTCAT GCTCGCCGGC
ACCTCCGGGG TGGGCAAGAC CGAGACCGCG CTGGCGCTGG CCGAGGCCAT GTACGGCGGC
GAGCAGAACG TCATCACCAT CAACATGAGC GAGTTCCAGG AAGCCCACAC CGTCTCCACC
CTCAAGGGCG CCCCGCCCGG CTACATCGGC TACGGCGAAG GCGGCGTGCT GACCGAGGCG
GTGCGCCGCA AGCCCTACAG CGTGGTGCTG CTGGACGAAG TGGAGAAGGC CCACCCGGAC
GTCCACGAGA TCTTCTTCCA GGTCTTCGAC AAGGGCGTGA TGGAGGACGG CGAAGGCCGG
CTGATCGACT TCAAGAACAC CCTGATCCTG CTCACCACCA ACGCCGGCAC CGAGATGATC
GCCAGCCTCT GCGCCGATCC GGAACTGATG CCCGAGCCGG AAGCCATCGC CAAGTCGCTG
CGCGAGCCGC TGCTGAAAAT CTTCCCGCCG GCGCTGCTCG GCCGCCTGGT GACCATCCCC
TACTACCCGC TCAGCGACGA CATGCTCAAG GCCATCTCGC GCCTGCAACT GGGGCGGATC
AAGAAGCGCG TGGAGGCGAC CCACAAGGTG CCGTTCGAGT TCGACGAGGG CGTCGTCGAC
CTGATCGTCT CGCGCTGCAC CGAGACCGAG AGCGGCGGGC GGATGATCGA CGCTATCCTC
ACCAACACGC TGCTGCCGGA CATGAGCCGC GAGTTCCTCA CCCGCATGCT CGAAGGCAAG
CCGTTGGCCG GGGTGCGCAT CAGCAGCCGC GACAACCAGT TCCACTACGA CTTCGCCACG
GCCGACTGA
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| Protein sequence | MSEISRVALF GKLNSLAYKA IEAATVFCKL RGNPYVELVH WFHQILQLPD SDLHQIVRQS
GIDPARLAKD LTEALDRLPR GSTSITDLSS HVEEAVERGW VYGSLMFGES QVRTGYLVIG
ILKTPSLRHA LTGLSAEFAK LKVEALTERF DEYVGASPEN GLSASDGFNA GAAPGEASGA
MAPSAMGRQE ALKRFTVDLT EQARSGKLDP IVGRDEEIRQ LVDILMRRRQ NNPILTGEAG
VGKTAVVEGF ALRIVAGDVP PALKDVELRA LDVGLLQAGA SMKGEFEQRL RQVIEDVQSS
EKPIILFIDE AHTLVGAGGA AGTGDAANLL KPALARGTLR TVAATTWAEY KKHIEKDPAL
TRRFQVVQVD EPSEHKAILM MRGVASTMEQ HHQVQILDEA LEAAVRLSHR YIPARQLPDK
SVSLLDTACA RTAISLHAVP AEVDDSRRRI EALETELAII RRESAIGVAT GERQRNAETL
LAEERERLAG LERRWAEEKR LVDELLETRA RLRAAAEAVD AGGTPLGEGE ARLDEEQRQA
LHARLAELQA QLSALQGEEP LILPTVDYQA VASVVADWTG IPVGRMARNE IETVLNLDSH
LKKRIIGQDH ALEMIAKRIQ TSRAGLDNPS KPIGVFMLAG TSGVGKTETA LALAEAMYGG
EQNVITINMS EFQEAHTVST LKGAPPGYIG YGEGGVLTEA VRRKPYSVVL LDEVEKAHPD
VHEIFFQVFD KGVMEDGEGR LIDFKNTLIL LTTNAGTEMI ASLCADPELM PEPEAIAKSL
REPLLKIFPP ALLGRLVTIP YYPLSDDMLK AISRLQLGRI KKRVEATHKV PFEFDEGVVD
LIVSRCTETE SGGRMIDAIL TNTLLPDMSR EFLTRMLEGK PLAGVRISSR DNQFHYDFAT
AD
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