| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0158 |
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| Symbol | |
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| ID | 5359337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 173677 |
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| End bp | 174462 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640809212 |
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| Product | virulence protein, SciE type |
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| Protein accession | YP_001345554 |
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| Protein GI | 152988565 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4455] Protein of avirulence locus involved in temperature-dependent protein secretion |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCG AAGAACTGTT GCGTGCCGGG CGCCTGGACG ACGCGCTGAA AGCCTTGCAG
GAGCAGGTGC GCAGCCAGCC GTCGAACGCC ACCCTGCGGA TCTTCCTGTT CCAGCTGCTG
GCGGTGATGG GCCAGTGGAC GCGGGCGCTG AACCAGCTCA AGGTGGTCGG CGAACTGGAC
GCCTCGGCAC TGCCGATGGT GCAGACCTAC TCCACCGCCA TCGAGTGCGA GGCGTTGCGC
CGCGAGGTGT TCGCCGGGCG CCTGACCCCG GTGATCCTCG GCCAGCCGGC GGAATGGATC
GCGCCGCTGC TGCAGGCCCT GAGCCTGGAC GCCGAGGGCC ATGGCGAAGC CGCCCAGGGC
TTGCGCGAGC AGGCTTTCGA CGCGGCGCCG GCGGTGCCCG GGCGGATCGG CGAGACGCCC
TTCGCCTGGC TGGCCGACGC CGACACCCGG CTCGGCCCGG TACTCGAGGT GATCGTCAAC
GGCCGCTATG CCTGGCTGCC GATGAGCAAC CTGCGCAGCC TCCAGGTCGA GGCGCCGAGC
GACCTGCGCG ACCTGGTCTG GCTGCCGGCC GAACTGACCC TGGCCAACGG CGGCGCCACC
GTCGCGCTGT TGCCGGCGCG CTACGCGGAA ACCGTCGAGC ACGGCGATGA CGCCGCGCGC
CTCGGGCGCA AGACCGAGTG GCTGGAGAGC GGCCTGCCGC TCGGCCAGCG GCTGTTCGTC
ACCGACGCCG GCGAAACCGC GCTGTTCGAC CTGCGCCGCC TGGACTTCGA GGCGACGGAC
GCCTGA
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| Protein sequence | MIAEELLRAG RLDDALKALQ EQVRSQPSNA TLRIFLFQLL AVMGQWTRAL NQLKVVGELD
ASALPMVQTY STAIECEALR REVFAGRLTP VILGQPAEWI APLLQALSLD AEGHGEAAQG
LREQAFDAAP AVPGRIGETP FAWLADADTR LGPVLEVIVN GRYAWLPMSN LRSLQVEAPS
DLRDLVWLPA ELTLANGGAT VALLPARYAE TVEHGDDAAR LGRKTEWLES GLPLGQRLFV
TDAGETALFD LRRLDFEATD A
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